RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 TRABDQ9H4I3 376 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 KCNK9Q9NPC2 374 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 C20orf96Q9NUD7 363 aaPredicted RBP20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 ZFATQ9P243 1243 aa20.61■□□□□ 0.89
SNRPA1-205ENST00000558036 GOLGA8RI6L899 631 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 SPAG7O75391 227 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 PDHA1P08559 390 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 BMP1P13497 986 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 MGAT5Q09328 741 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 DHCR24Q15392 516 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 ARFGAP2Q8N6H7 521 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 PDCD6IPQ8WUM4 868 aaKnown RBP20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 TRIB3Q96RU7 358 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 GGA2Q9UJY4 613 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 TMEM120BA0PK00 339 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 CYP17A1P05093 508 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 TERF2Q15554 542 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 OSCP1Q8WVF1 389 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 OTUB2Q96DC9 234 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 CAPS2Q9BXY5 557 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 MLXIPLQ9NP71 852 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 CLEC1BQ9P126 229 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 RAI2Q9Y5P3 530 aa20.6■□□□□ 0.89
SNRPA1-205ENST00000558036 SLC9A3R1O14745 358 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 PABPC1P11940 636 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 ARSAP15289 507 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 CHN1P15882 459 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 KRT4P19013 534 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 GKP32189 559 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 CNGA3Q16281 694 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 EML3Q32P44 896 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 KCNMB4Q86W47 210 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 MGARPQ8TDB4 240 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 BLOC1S5Q8TDH9 187 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 CDKL2Q92772 493 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 TDRD1Q9BXT4 1180 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 EBF3Q9H4W6 596 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 OTOL1A6NHN0 477 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 HEPACAM2A8MVW5 462 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 BUD23O43709 281 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 PRLP01236 227 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 SP100P23497 879 aaPredicted RBP20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 ADRA1DP25100 572 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 MDH1P40925 334 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 PLK1P53350 603 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 TRAF2Q12933 501 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 MROH9Q5TGP6 573 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 MARK2Q7KZI7 788 aaKnown RBP20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 ANKRD42Q8N9B4 389 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 BPIFB1Q8TDL5 484 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 SERAC1Q96JX3 654 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 KCTD3Q9Y597 815 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 MYLKQ15746 1914 aa20.59■□□□□ 0.89
SNRPA1-205ENST00000558036 IQANK1A0A1B0GTG1 560 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 HMX2A2RU54 273 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 TRIM49D1C9J1S8 452 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 CCL22O00626 93 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 TBX10O75333 385 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 ZNF821O75541 412 aaPredicted RBP20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 VAPBO95292 243 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 HLA-DPA1P20036 260 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 GNGT1P63211 74 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 NR1H3Q13133 447 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 ADAM15Q13444 863 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 PTPRRQ15256 657 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 DGKKQ5KSL6 1271 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 TMEM215Q68D42 235 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 TANGO2Q6ICL3 276 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 NCEH1Q6PIU2 408 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 PACS1Q6VY07 963 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 RMDN1Q96DB5 314 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 IARS2Q9NSE4 1012 aaKnown RBP20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 GDE1Q9NZC3 331 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 MARK1Q9P0L2 795 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 ZNF180Q9UJW8 692 aa20.58■□□□□ 0.89
SNRPA1-205ENST00000558036 BNIP3LO60238 219 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 NDST3O95803 873 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 EPOP01588 193 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 SRCP12931 536 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 FCARP24071 287 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 ARNTP27540 789 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 ABCG1P45844 678 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 NSUN2Q08J23 767 aaKnown RBP eCLIP20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 SLC12A1Q13621 1099 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 LRRC14Q15048 493 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 ADIPOR2Q86V24 386 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 C12orf40Q86WS4 652 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 LPCAT1Q8NF37 534 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 SORCS1Q8WY21 1168 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 ATXN7L3BQ96GX2 97 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 TREX1Q9NSU2 369 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 EVLQ9UI08 416 aaPredicted RBP20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 ARL5AQ9Y689 179 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 HEATR9A2RTY3 570 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 FGF1P05230 155 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 ADH5P11766 374 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 GABPB1Q06547 395 aaPredicted RBP20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 PTPRCAPQ14761 206 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 GEN1Q17RS7 908 aa20.57■□□□□ 0.88
SNRPA1-205ENST00000558036 TEDDM1Q5T9Z0 273 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms