RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 SETD3Q86TU7 594 aaPredicted RBP16.91■□□□□ 0.3
NEK9-211ENST00000557673 SLC25A45Q8N413 288 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 SH2D3CQ8N5H7 860 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 ZNF248Q8NDW4 579 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 OR7D4Q8NG98 312 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 OR4C6Q8NH72 309 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 FAM174AQ8TBP5 190 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 LGMNQ99538 433 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 MAGEB5Q9BZ81 275 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 ZYG11BQ9C0D3 744 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 GPATCH2LQ9NWQ4 482 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 PCSK1NQ9UHG2 260 aa16.91■□□□□ 0.3
NEK9-211ENST00000557673 ARID1BQ8NFD5 2236 aaPredicted RBP16.9■□□□□ 0.3
NEK9-211ENST00000557673 NEMP2A6NFY4 417 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 BTNL10A8MVZ5 291 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 FAM72CH0Y354 149 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 K7ERQ8 282 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 PJA2O43164 708 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 BNIP3LO60238 219 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 C1QL1O75973 258 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 LRIG2O94898 1065 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 THEGLP0DJG4 465 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 SRCP12931 536 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 DGKAP23743 735 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 AKT2P31751 481 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 UCNP55089 124 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 POM121L1PQ3SYA9 428 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 FAM72AQ5TYM5 149 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 FAM72DQ6L9T8 149 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 LINGO4Q6UY18 593 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 KDM7AQ6ZMT4 941 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 KIAA1328Q86T90 577 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 FAM72BQ86X60 149 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 PSTKQ8IV42 348 aaKnown RBP16.9■□□□□ 0.3
NEK9-211ENST00000557673 SPACA3Q8IXA5 215 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 PYROXD2Q8N2H3 581 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 DCAF4L2Q8NA75 395 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 TMEM145Q8NBT3 493 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 ZNF578Q96N58 590 aaPredicted RBP16.9■□□□□ 0.3
NEK9-211ENST00000557673 DEPDC7Q96QD5 511 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 C2orf49Q9BVC5 232 aaPredicted RBP16.9■□□□□ 0.3
NEK9-211ENST00000557673 LACRTQ9GZZ8 138 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 USP29Q9HBJ7 922 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 DYRK4Q9NR20 520 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 PPARGC1AQ9UBK2 798 aaKnown RBP16.9■□□□□ 0.3
NEK9-211ENST00000557673 OR12D3Q9UGF7 316 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 HS3ST2Q9Y278 367 aa16.9■□□□□ 0.3
NEK9-211ENST00000557673 TMEM110-MUSTN1A8MSY1 372 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 SLC31A1O15431 190 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 NRDCO43847 1150 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 CKMT1AP12532 417 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 L1CAMP32004 1257 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 ARHGAP25P42331 645 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 DUSP3P51452 185 aaPredicted RBP16.89■□□□□ 0.29
NEK9-211ENST00000557673 PCBP4P57723 403 aaKnown RBP16.89■□□□□ 0.29
NEK9-211ENST00000557673 CXADRP78310 365 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 MESDQ14696 234 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 CA9Q16790 459 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 SMTNL2Q2TAL5 461 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 ERMARDQ5T6L9 678 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 TXNRD3NBQ6F5E7 133 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 ATP11CQ8NB49 1132 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 TMIEQ8NEW7 156 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 TEKT4Q8WW24 435 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 TBC1D31Q96DN5 1066 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 IFT43Q96FT9 208 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 KCTD15Q96SI1 283 aaPredicted RBP16.89■□□□□ 0.29
NEK9-211ENST00000557673 EPAS1Q99814 870 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 SPON2Q9BUD6 331 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 ABCG4Q9H172 646 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 SALL4Q9UJQ4 1053 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 ADGRG1Q9Y653 693 aa16.89■□□□□ 0.29
NEK9-211ENST00000557673 MYLKQ15746 1914 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 A0A0U1RQJ8 604 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 A0A1W2PQU0 124 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 ILVBLA1L0T0 632 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 ERVH48-1M5A8F1 160 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 SMAD6O43541 496 aaKnown RBP16.88■□□□□ 0.29
NEK9-211ENST00000557673 OPA1O60313 960 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 BUB1BO60566 1050 aaPredicted RBP16.88■□□□□ 0.29
NEK9-211ENST00000557673 PRNPP04156 253 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 GP1BAP07359 652 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 HNRNPA2B1P22626 353 aaKnown RBP16.88■□□□□ 0.29
NEK9-211ENST00000557673 DPYSL2Q16555 572 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 C11orf63Q6NUN7 778 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 RWDD4Q6NW29 188 aaKnown RBP16.88■□□□□ 0.29
NEK9-211ENST00000557673 HORMAD1Q86X24 394 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 DCP2Q8IU60 420 aaKnown RBP16.88■□□□□ 0.29
NEK9-211ENST00000557673 TXLNBQ8N3L3 684 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 DUSP23Q9BVJ7 150 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 DHX35Q9H5Z1 703 aaKnown RBP16.88■□□□□ 0.29
NEK9-211ENST00000557673 ZWILCHQ9H900 591 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 ATP13A1Q9HD20 1204 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.88■□□□□ 0.29
NEK9-211ENST00000557673 NLGN3Q9NZ94 848 aa16.88■□□□□ 0.29
NEK9-211ENST00000557673 KPNA3O00505 521 aaPredicted RBP16.87■□□□□ 0.29
NEK9-211ENST00000557673 RIOK3O14730 519 aaKnown RBP16.87■□□□□ 0.29
NEK9-211ENST00000557673 FFAR2O15552 330 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 PIAS2O75928 621 aa16.87■□□□□ 0.29
NEK9-211ENST00000557673 PTMAP06454 111 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms