RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 POPDC2Q9HBU9 364 aa10.52□□□□□ -0.73
TRAV33-201ENST00000557514 MBNL1Q9NR56 388 aaKnown RBP10.52□□□□□ -0.73
TRAV33-201ENST00000557514 LRIT1Q9P2V4 623 aa10.52□□□□□ -0.73
TRAV33-201ENST00000557514 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.73
TRAV33-201ENST00000557514 PILRAQ9UKJ1 303 aa10.52□□□□□ -0.73
TRAV33-201ENST00000557514 FBN3Q75N90 2809 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 A0A0D9SEW6 157 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 C16orf96A6NNT2 1141 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 MKRN2OSH3BPM6 223 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 NEMP1O14524 444 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 POLR2DO15514 142 aaKnown RBP10.51□□□□□ -0.73
TRAV33-201ENST00000557514 PPP6R2O75170 966 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 ENDOD1O94919 500 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 RHOCP08134 193 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 BRD2P25440 801 aaKnown RBP10.51□□□□□ -0.73
TRAV33-201ENST00000557514 SERPINH1P50454 418 aaKnown RBP10.51□□□□□ -0.73
TRAV33-201ENST00000557514 NFATC4Q14934 902 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 NR1D2Q14995 579 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 IRF4Q15306 451 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 STILQ15468 1287 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 CNGA2Q16280 664 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 CBWD6Q4V339 395 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 CBWD3Q5JTY5 395 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 CBWD5Q5RIA9 395 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 ATP1A1-AS1Q5TC04 95 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 KCTD16Q68DU8 428 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 NYAP1Q6ZVC0 841 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 ASB18Q6ZVZ8 466 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 PIM3Q86V86 326 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 CCDC13Q8IYE1 715 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 GRAMD1CQ8IYS0 662 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 AGBL5Q8NDL9 886 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 ARHGEF26Q96DR7 871 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 EFHD1Q9BUP0 239 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 C1QTNF7Q9BXJ2 289 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 ASPSCR1Q9BZE9 553 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 FAM204AQ9H8W3 233 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 COQ4Q9Y3A0 265 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 KCTD3Q9Y597 815 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 HS3ST4Q9Y661 456 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 KCNMB2Q9Y691 235 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 DGKBQ9Y6T7 804 aa10.51□□□□□ -0.73
TRAV33-201ENST00000557514 TRPM6Q9BX84 2022 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 LOC101059948A0A1B0GTJ6 334 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 TTLL8A6PVC2 850 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 B4E171 279 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 B4GAT1O43505 415 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 ZMPSTE24O75844 475 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 PDCP20941 246 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 TSPAN7P41732 249 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 RAB15P59190 212 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 SRP54P61011 504 aaKnown RBP10.5□□□□□ -0.73
TRAV33-201ENST00000557514 MC1RQ01726 317 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 MTA1Q13330 715 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 TRA2AQ13595 282 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRAV33-201ENST00000557514 ARHGEF7Q14155 803 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 STK38Q15208 465 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 EDRF1Q3B7T1 1238 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 ZCWPW2Q504Y3 356 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 ALFQ53S48 1182 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 ZNF805Q5CZA5 627 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 TMEM270Q6UE05 265 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 SETD3Q86TU7 594 aaPredicted RBP10.5□□□□□ -0.73
TRAV33-201ENST00000557514 UNC5BQ8IZJ1 945 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 NLGN4XQ8N0W4 816 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 NLGN4YQ8NFZ3 816 aaPredicted RBP10.5□□□□□ -0.73
TRAV33-201ENST00000557514 SPRY4Q9C004 299 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 ZDHHC6Q9H6R6 413 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 CASS4Q9NQ75 786 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 DDIT4Q9NX09 232 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 DONSONQ9NYP3 566 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 DKK3Q9UBP4 350 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 KLQ9UEF7 1012 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 MED13Q9UHV7 2174 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 CCDC168Q8NDH2 2452 aa10.5□□□□□ -0.73
TRAV33-201ENST00000557514 TMEM110-MUSTN1A8MSY1 372 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 B4DGG1 531 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 STX10O60499 249 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 CUTAO60888 179 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 PAGE1O75459 146 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 TM7SF2O76062 418 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 SORBS2O94875 1100 aaKnown RBP10.49□□□□□ -0.73
TRAV33-201ENST00000557514 LDLRP01130 860 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 PDGFAP04085 211 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 THRAP10827 490 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 TBXAS1P24557 533 aaPredicted RBP10.49□□□□□ -0.73
TRAV33-201ENST00000557514 MAP4P27816 1152 aaKnown RBP10.49□□□□□ -0.73
TRAV33-201ENST00000557514 HTR1BP28222 390 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 GPD2P43304 727 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 ACADSBP45954 432 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 COPB1P53618 953 aaKnown RBP10.49□□□□□ -0.73
TRAV33-201ENST00000557514 LIMK2P53671 638 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 YWHAZP63104 245 aaKnown RBP10.49□□□□□ -0.73
TRAV33-201ENST00000557514 ARF5P84085 180 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 ABHD18Q0P651 414 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 KLHL40Q2TBA0 621 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 AMZ1Q400G9 498 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 CARD16Q5EG05 197 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 SPECC1LQ69YQ0 1117 aa10.49□□□□□ -0.73
TRAV33-201ENST00000557514 RETSATQ6NUM9 610 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms