RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 ADAP00813 363 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 DHRS4L1P0CG22 281 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 IGHV4-30-4P0DP06 118 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 TNNT1P13805 278 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 SSTR2P30874 369 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 TTKP33981 857 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 ARSFP54793 590 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 KRTAP10-5P60370 271 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 ARL16Q0P5N6 197 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 HDAC1Q13547 482 aaPredicted RBP4.32□□□□□ -1.72
VRK1-207ENST00000557352 NAPEPLDQ6IQ20 393 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 KLHL24Q6TFL4 600 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 CCDC129Q6ZRS4 1044 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 GHDCQ8N2G8 530 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 POF1BQ8WVV4 589 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 SORCS1Q8WY21 1168 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 SDCCAG3Q96C92 435 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 RNFT2Q96EX2 444 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 RBM17Q96I25 401 aaKnown RBP4.32□□□□□ -1.72
VRK1-207ENST00000557352 YME1L1Q96TA2 773 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 SAYSD1Q9NPB0 183 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 PAM16Q9Y3D7 125 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 KIF21AQ7Z4S6 1674 aa4.32□□□□□ -1.72
VRK1-207ENST00000557352 ABCC8Q09428 1581 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 PRR23AA6NEV1 266 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 FAM155BO75949 473 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 HMGB1P09429 215 aaKnown RBP4.31□□□□□ -1.72
VRK1-207ENST00000557352 VEGFAP15692 232 aaPredicted RBP4.31□□□□□ -1.72
VRK1-207ENST00000557352 HNF1BP35680 557 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 HILS1P60008 231 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 GOLGA8FQ08AF8 430 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 CBWD5Q5RIA9 395 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 FAM83BQ5T0W9 1011 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 C9orf139Q6ZV77 190 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 SMIM29Q86T20 159 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 CCDC105Q8IYK2 499 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 RUBCNQ92622 972 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 LRFN5Q96NI6 719 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 ZNF385AQ96PM9 386 aaKnown RBP4.31□□□□□ -1.72
VRK1-207ENST00000557352 ANKRD10Q9NXR5 420 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 CNPY2Q9Y2B0 182 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 KIF26BQ2KJY2 2108 aa4.31□□□□□ -1.72
VRK1-207ENST00000557352 WRNQ14191 1432 aaPredicted RBP eCLIP4.3□□□□□ -1.72
VRK1-207ENST00000557352 EEA1Q15075 1411 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 LMX1BO60663 402 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 PMS2P2O95744 297 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 AMD1P17707 334 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 LIFRP42702 1097 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 AARSP49588 968 aaKnown RBP eCLIP4.3□□□□□ -1.72
VRK1-207ENST00000557352 CALCRLQ16602 461 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 MRGPRG-AS1Q2M3A8 158 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 DNAAF1Q8NEP3 725 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 ARRDC2Q8TBH0 407 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 NEK9Q8TD19 979 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 TMEM170AQ8WVE7 144 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 THAP4Q8WY91 577 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 MTBPQ96DY7 904 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 LTV1Q96GA3 475 aaPredicted RBP4.3□□□□□ -1.72
VRK1-207ENST00000557352 TTC12Q9H892 705 aaPredicted RBP4.3□□□□□ -1.72
VRK1-207ENST00000557352 ENTPD7Q9NQZ7 604 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 SPATS2LQ9NUQ6 558 aaKnown RBP4.3□□□□□ -1.72
VRK1-207ENST00000557352 DAAM1Q9Y4D1 1078 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 WDR97A6NE52 1622 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 DNMBPQ6XZF7 1577 aa4.3□□□□□ -1.72
VRK1-207ENST00000557352 CPED1A4D0V7 1026 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 STX16-NPEPL1H3BU86 382 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 STX16O14662 325 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 DHX16O60231 1041 aaKnown RBP4.29□□□□□ -1.72
VRK1-207ENST00000557352 GAGE7O76087 117 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 GAGE12FP0CL80 117 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 GAGE12GP0CL81 117 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 GAGE12IP0CL82 117 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 ADD2P35612 726 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 CXCR3P49682 368 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 GAGE1Q13065 139 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 GAGE4Q13068 117 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 SLC18A3Q16572 532 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 STPG1Q5TH74 334 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 DENND1BQ6P3S1 775 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 UNQ6126/PRO20091Q6UXV3 157 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 TUBA1AQ71U36 451 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 DCUN1D3Q8IWE4 304 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 SFTPA2Q8IWL1 248 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 LMNTD1Q8N9Z9 388 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 HSPH1Q92598 858 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 OR1F2PQ96R84 312 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 EPYCQ99645 322 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 TUBA1CQ9BQE3 449 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 EVA1AQ9H8M9 152 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 UBTD1Q9HAC8 227 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 IFT80Q9P2H3 777 aaPredicted RBP4.29□□□□□ -1.72
VRK1-207ENST00000557352 DERAQ9Y315 318 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 CUX1P39880 1505 aa4.29□□□□□ -1.72
VRK1-207ENST00000557352 hDV102S1A0JD36 115 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 XPNPEP2O43895 674 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 CGAP01215 116 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 TK1P04183 234 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 TFPIP10646 304 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 DGKAP23743 735 aa4.28□□□□□ -1.72
VRK1-207ENST00000557352 TRIM14Q14142 442 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms