RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 DPH1Q9BZG8 443 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 CEP44Q9C0F1 390 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 MUC3BQ9H195 1237 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 RETREG1Q9H6L5 497 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 WDCPQ9H6R7 721 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 GPR27Q9NS67 375 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 ARHGEF38Q9NXL2 777 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 APEX2Q9UBZ4 518 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 VANGL2Q9ULK5 521 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 CSNK1G3Q9Y6M4 447 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 TRPM6Q9BX84 2022 aa8.85□□□□□ -0.99
VRK1-206ENST00000557222 IGLV3-10A0A075B6K4 115 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 ILVBLA1L0T0 632 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 A6NNZ2 444 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 BECN2A8MW95 431 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 KPNA3O00505 521 aaPredicted RBP8.84□□□□□ -0.99
VRK1-206ENST00000557222 SLC31A1O15431 190 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 AP1G1O43747 822 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 SDC3O75056 442 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 CTSLP07711 333 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 RHOCP08134 193 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 BMP6P22004 513 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 KRT9P35527 623 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 RECQLP46063 649 aaPredicted RBP8.84□□□□□ -0.99
VRK1-206ENST00000557222 TMPRSS3P57727 454 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 BPIFB4P59827 614 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 RPS21P63220 83 aaKnown RBP8.84□□□□□ -0.99
VRK1-206ENST00000557222 NME3Q13232 169 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 PERM1Q5SV97 790 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 OR6B2Q6IFH4 312 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 RETSATQ6NUM9 610 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 LRRC31Q6UY01 552 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 KDM7AQ6ZMT4 941 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 GBP6Q6ZN66 633 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 ZNF605Q86T29 641 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 ZNF683Q8IZ20 524 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 ZNF843Q8N446 348 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 ARRDC3Q96B67 414 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 FEM1CQ96JP0 617 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 LENG8Q96PV6 779 aaPredicted RBP8.84□□□□□ -0.99
VRK1-206ENST00000557222 PSMB7Q99436 277 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 NPY6RQ99463 290 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 LGMNQ99538 433 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 POLR1BQ9H9Y6 1135 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 FRRS1LQ9P0K9 344 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 IL36AQ9UHA7 158 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 STAP1Q9ULZ2 295 aa8.84□□□□□ -0.99
VRK1-206ENST00000557222 SYNJ2BP-COX16A0A087WUM0 186 aa8.83□□□□□ -1
VRK1-206ENST00000557222 SPTY2D1-AS1A0A0U1RR47 76 aa8.83□□□□□ -1
VRK1-206ENST00000557222 M0QYT0 321 aa8.83□□□□□ -1
VRK1-206ENST00000557222 TOR1BO14657 336 aa8.83□□□□□ -1
VRK1-206ENST00000557222 TPP1O14773 563 aa8.83□□□□□ -1
VRK1-206ENST00000557222 PCDH8O95206 1070 aa8.83□□□□□ -1
VRK1-206ENST00000557222 MT-CO1P00395 513 aa8.83□□□□□ -1
VRK1-206ENST00000557222 CSF2P04141 144 aa8.83□□□□□ -1
VRK1-206ENST00000557222 NME1P15531 152 aaKnown RBP8.83□□□□□ -1
VRK1-206ENST00000557222 PRLRP16471 622 aa8.83□□□□□ -1
VRK1-206ENST00000557222 ITGB7P26010 798 aa8.83□□□□□ -1
VRK1-206ENST00000557222 RABIFP47224 123 aa8.83□□□□□ -1
VRK1-206ENST00000557222 GABRB2P47870 512 aa8.83□□□□□ -1
VRK1-206ENST00000557222 NEK3P51956 506 aa8.83□□□□□ -1
VRK1-206ENST00000557222 CFHR1Q03591 330 aa8.83□□□□□ -1
VRK1-206ENST00000557222 CCDC173Q0VFZ6 552 aa8.83□□□□□ -1
VRK1-206ENST00000557222 DOC2BQ14184 412 aa8.83□□□□□ -1
VRK1-206ENST00000557222 EXOC3L4Q17RC7 722 aa8.83□□□□□ -1
VRK1-206ENST00000557222 SLC25A52Q3SY17 297 aa8.83□□□□□ -1
VRK1-206ENST00000557222 ISM2Q6H9L7 571 aa8.83□□□□□ -1
VRK1-206ENST00000557222 ZCCHC8Q6NZY4 707 aaKnown RBP8.83□□□□□ -1
VRK1-206ENST00000557222 C22orf39Q6P5X5 142 aa8.83□□□□□ -1
VRK1-206ENST00000557222 KYAT3Q6YP21 454 aaKnown RBP8.83□□□□□ -1
VRK1-206ENST00000557222 GCNT7Q6ZNI0 430 aa8.83□□□□□ -1
VRK1-206ENST00000557222 Q6ZSR6 202 aa8.83□□□□□ -1
VRK1-206ENST00000557222 FAM183BPQ6ZVS7 135 aa8.83□□□□□ -1
VRK1-206ENST00000557222 ARCQ7LC44 396 aa8.83□□□□□ -1
VRK1-206ENST00000557222 C14orf80Q86SX3 495 aa8.83□□□□□ -1
VRK1-206ENST00000557222 PCDH20Q8N6Y1 951 aaKnown RBP8.83□□□□□ -1
VRK1-206ENST00000557222 OR13H1Q8NG92 308 aa8.83□□□□□ -1
VRK1-206ENST00000557222 WDR48Q8TAF3 677 aa8.83□□□□□ -1
VRK1-206ENST00000557222 RAB7BQ96AH8 199 aa8.83□□□□□ -1
VRK1-206ENST00000557222 ISG20Q96AZ6 181 aaKnown RBP8.83□□□□□ -1
VRK1-206ENST00000557222 APOLD1Q96LR9 279 aa8.83□□□□□ -1
VRK1-206ENST00000557222 TBATAQ96M53 351 aa8.83□□□□□ -1
VRK1-206ENST00000557222 HAPLN3Q96S86 360 aa8.83□□□□□ -1
VRK1-206ENST00000557222 CALN1Q9BXU9 219 aa8.83□□□□□ -1
VRK1-206ENST00000557222 SLC17A9Q9BYT1 436 aa8.83□□□□□ -1
VRK1-206ENST00000557222 TKTL2Q9H0I9 626 aa8.83□□□□□ -1
VRK1-206ENST00000557222 SIK2Q9H0K1 926 aa8.83□□□□□ -1
VRK1-206ENST00000557222 ABCG4Q9H172 646 aa8.83□□□□□ -1
VRK1-206ENST00000557222 ACP6Q9NPH0 428 aa8.83□□□□□ -1
VRK1-206ENST00000557222 THSD1Q9NS62 852 aa8.83□□□□□ -1
VRK1-206ENST00000557222 UCKL1Q9NWZ5 548 aa8.83□□□□□ -1
VRK1-206ENST00000557222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.83□□□□□ -1
VRK1-206ENST00000557222 COX16Q9P0S2 106 aa8.83□□□□□ -1
VRK1-206ENST00000557222 VPS51Q9UID3 782 aa8.83□□□□□ -1
VRK1-206ENST00000557222 SALL4Q9UJQ4 1053 aa8.83□□□□□ -1
VRK1-206ENST00000557222 ZFR2Q9UPR6 939 aaKnown RBP8.83□□□□□ -1
VRK1-206ENST00000557222 CTNND2Q9UQB3 1225 aa8.83□□□□□ -1
VRK1-206ENST00000557222 TDRD6O60522 2096 aaKnown RBP8.83□□□□□ -1
VRK1-206ENST00000557222 AHCTF1Q8WYP5 2266 aa8.83□□□□□ -1
VRK1-206ENST00000557222 NAV2Q8IVL1 2488 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms