RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CLEC4CQ8WTT0 213 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 TRIB2Q92519 343 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 CCT6BQ92526 530 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 RSC1A1Q92681 617 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 FRAT1Q92837 279 aaPredicted RBP5.59□□□□□ -1.51
HIF1A-209ENST00000556827 C3orf49Q96BT1 292 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 TRAPPC9Q96Q05 1148 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 TMEM79Q9BSE2 394 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 GATA5Q9BWX5 397 aaPredicted RBP5.59□□□□□ -1.51
HIF1A-209ENST00000556827 AATFQ9NY61 560 aaKnown RBP eCLIP5.59□□□□□ -1.51
HIF1A-209ENST00000556827 RABGAP1Q9Y3P9 1069 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 PCDHGB3Q9Y5G1 929 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 ARAP2Q8WZ64 1704 aa5.59□□□□□ -1.51
HIF1A-209ENST00000556827 COL2A1P02458 1487 aaPredicted RBP5.58□□□□□ -1.52
HIF1A-209ENST00000556827 RFX7Q2KHR2 1363 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 SLC15A5A6NIM6 579 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 KBTBD13C9JR72 458 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 SOCS2O14508 198 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 IDH1O75874 414 aaKnown RBP5.58□□□□□ -1.52
HIF1A-209ENST00000556827 FGBP02675 491 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 CYP21A2P08686 494 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 ST6GAL1P15907 406 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 GRK5P34947 590 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 GRK6P43250 576 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 FOXL2P58012 376 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 FOXO1Q12778 655 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 TAF5Q15542 800 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 GALNTL6Q49A17 601 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 MAP3K21Q5TCX8 1036 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 WDR93Q6P2C0 686 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 TMED8Q6PL24 325 aaPredicted RBP5.58□□□□□ -1.52
HIF1A-209ENST00000556827 RAB11FIP2Q7L804 512 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 RFX6Q8HWS3 928 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 NKAPQ8N5F7 415 aaKnown RBP5.58□□□□□ -1.52
HIF1A-209ENST00000556827 ASB12Q8WXK4 309 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 RUBCNQ92622 972 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 RILPL2Q969X0 211 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 FCRL5Q96RD9 977 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 TMEM120AQ9BXJ8 343 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 RNF26Q9BY78 433 aaPredicted RBP5.58□□□□□ -1.52
HIF1A-209ENST00000556827 MTMR10Q9NXD2 777 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 PCDHA10Q9Y5I2 948 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 SIRT4Q9Y6E7 314 aaPredicted RBP5.58□□□□□ -1.52
HIF1A-209ENST00000556827 OTOFQ9HC10 1997 aa5.58□□□□□ -1.52
HIF1A-209ENST00000556827 LAMB1P07942 1786 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 FLT1P17948 1338 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3DA0A087WVF3 549 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3IA0A087WXS9 549 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3EA0A087X179 549 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3KA0A087X1G2 549 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3BA6NDS4 549 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3FA6NER0 549 aaPredicted RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3LB9A6J9 549 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 ADAM10O14672 748 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 KCNAB3O43448 404 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 STRNO43815 780 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 SURF6O75683 361 aaKnown RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 LARGE1O95461 756 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 GH2P01242 217 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3HP0C7X1 549 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TACR3P29371 465 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 RARSP54136 660 aaKnown RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 POLE2P56282 527 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 SLC37A1P57057 533 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 SHC2P98077 582 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 MTA1Q13330 715 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TTC22Q5TAA0 569 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3GQ6DHY5 549 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 FAM109BQ6ICB4 259 aaPredicted RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3CQ6IPX1 549 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 KIAA1324Q6UXG2 1013 aaKnown RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 SYNE3Q6ZMZ3 975 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 Q7L0L9 218 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 RHPN2Q8IUC4 686 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D3Q8IZP1 549 aaPredicted RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 NRACQ8N912 160 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TRAPPC12Q8WVT3 735 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 LPAR1Q92633 364 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 PIGKQ92643 395 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TBC1D20Q96BZ9 403 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 ZNF845Q96IR2 970 aaPredicted RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 SENP7Q9BQF6 1050 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 WACQ9BTA9 647 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 DDX23Q9BUQ8 820 aaKnown RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 MYLK2Q9H1R3 596 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 PRDM16Q9HAZ2 1276 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 TXNRD2Q9NNW7 524 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 GPR108Q9NPR9 543 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 LIN7CQ9NUP9 197 aaKnown RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 HOXC10Q9NYD6 342 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 KCND3Q9UK17 655 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 NFU1Q9UMS0 254 aa5.57□□□□□ -1.52
HIF1A-209ENST00000556827 C19orf53Q9UNZ5 99 aaPredicted RBP5.57□□□□□ -1.52
HIF1A-209ENST00000556827 MYMKA6NI61 221 aa5.56□□□□□ -1.52
HIF1A-209ENST00000556827 H0Y3Z8 333 aa5.56□□□□□ -1.52
HIF1A-209ENST00000556827 DNM1LO00429 736 aa5.56□□□□□ -1.52
HIF1A-209ENST00000556827 MPHOSPH10O00566 681 aaKnown RBP5.56□□□□□ -1.52
HIF1A-209ENST00000556827 KRT38O76015 456 aa5.56□□□□□ -1.52
HIF1A-209ENST00000556827 HEXIM1O94992 359 aaKnown RBP5.56□□□□□ -1.52
HIF1A-209ENST00000556827 NTN1O95631 604 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms