RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 LIPCP11150 499 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 GKP32189 559 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 IGFALSP35858 605 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 PEX5P50542 639 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 SNRPD1P62314 119 aaKnown RBP12.05□□□□□ -0.48
ACTN1-221ENST00000556571 MORC3Q14149 939 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 TGIF1Q15583 401 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 MYLK3Q32MK0 819 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 B3GNT8Q7Z7M8 397 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 TTC7BQ86TV6 843 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 DRC7Q8IY82 874 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 OR6C4Q8NGE1 309 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 OR2AP1Q8NGE2 309 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 OR6K2Q8NGY2 324 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 EXTL1Q92935 676 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 CCDC74AQ96AQ1 378 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 KLHL32Q96NJ5 620 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 SEMA3CQ99985 751 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 TRIM4Q9C037 500 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 RETREG1Q9H6L5 497 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 SEPT10Q9P0V9 454 aa12.05□□□□□ -0.48
ACTN1-221ENST00000556571 COL27A1Q8IZC6 1860 aaPredicted RBP12.05□□□□□ -0.48
ACTN1-221ENST00000556571 GTPBP10A4D1E9 387 aaKnown RBP12.04□□□□□ -0.48
ACTN1-221ENST00000556571 SUV39H1O43463 412 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 MMP20O60882 483 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 RPLP0P05388 317 aaKnown RBP12.04□□□□□ -0.48
ACTN1-221ENST00000556571 UGT2B4P06133 528 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 JMJD7P0C870 316 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 CTSEP14091 401 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 ITGB6P18564 788 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 CCKBRP32239 447 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 CLCN1P35523 988 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 ACVRL1P37023 503 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 GABRB2P47870 512 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 HK3P52790 923 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 BPIFB4P59827 614 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 CCL7P80098 99 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 APBA1Q02410 837 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 C1QBPQ07021 282 aaKnown RBP12.04□□□□□ -0.48
ACTN1-221ENST00000556571 SRSF1Q07955 248 aaKnown RBP eCLIP12.04□□□□□ -0.48
ACTN1-221ENST00000556571 EXOC3L4Q17RC7 722 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 FAM102AQ5T9C2 384 aaPredicted RBP12.04□□□□□ -0.48
ACTN1-221ENST00000556571 SLC47A2Q86VL8 602 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 ZSCAN1Q8NBB4 408 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 TMEM35BQ8NCS4 154 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 PCDH19Q8TAB3 1148 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 CXorf40AQ8TE69 158 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 ARHGEF2Q92974 986 aaKnown RBP12.04□□□□□ -0.48
ACTN1-221ENST00000556571 TMEM159Q96B96 161 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 C18orf8Q96DM3 657 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 CPEB1Q9BZB8 566 aaKnown RBP12.04□□□□□ -0.48
ACTN1-221ENST00000556571 EDEM3Q9BZQ6 932 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 FOXP3Q9BZS1 431 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 PDCL3Q9H2J4 239 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 PLCB1Q9NQ66 1216 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 MBNL1Q9NR56 388 aaKnown RBP12.04□□□□□ -0.48
ACTN1-221ENST00000556571 SIRPGQ9P1W8 387 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 RABGEF1Q9UJ41 708 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 HPCAL4Q9UM19 191 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 GPR34Q9UPC5 381 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 ACTL7AQ9Y615 435 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 LRRK2Q5S007 2527 aa12.04□□□□□ -0.48
ACTN1-221ENST00000556571 A0A1W2PQM1 296 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 FOXN3O00409 490 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-221ENST00000556571 RASGRP1O95267 797 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 CELA2BP08218 269 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-221ENST00000556571 HGFP14210 728 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 PON1P27169 355 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 HTR1BP28222 390 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 CDH5P33151 784 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-221ENST00000556571 FLT3P36888 993 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 MAPKAPK2P49137 400 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 RAD51Q06609 339 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 KLHL40Q2TBA0 621 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 MANEAQ5SRI9 462 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 GDPD4Q6W3E5 623 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 ZNF574Q6ZN55 896 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-221ENST00000556571 BNIPLQ7Z465 357 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 FAM131BQ86XD5 332 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 GKN2Q86XP6 184 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 CREBRFQ8IUR6 639 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 HID1Q8IV36 788 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 KYQ8NBH2 561 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 TP53I13Q8NBR0 393 aaPredicted RBP12.03□□□□□ -0.48
ACTN1-221ENST00000556571 VOPP1Q96AW1 172 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 EPAS1Q99814 870 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 MAGEH1Q9H213 219 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 LRRN3Q9H3W5 708 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 PISDQ9UG56 409 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 DNAJC12Q9UKB3 198 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 LOXL2Q9Y4K0 774 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 PCDHB11Q9Y5F2 797 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 FLNCQ14315 2725 aa12.03□□□□□ -0.48
ACTN1-221ENST00000556571 UNC13CQ8NB66 2214 aa12.02□□□□□ -0.48
ACTN1-221ENST00000556571 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 COL12A1Q99715 3063 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 BIN1O00499 593 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 FAM87AP0C7U9 286 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 RHOQP17081 205 aa12.02□□□□□ -0.49
ACTN1-221ENST00000556571 SUOXP51687 545 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms