RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ITIH2P19823 946 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 HLA-DPA1P20036 260 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 C5AR1P21730 350 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 NFKBIAP25963 317 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 ITGB7P26010 798 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 PSMB4P28070 264 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 SCNN1BP51168 640 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 NUBP1P53384 320 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 COPAP53621 1224 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 MAXP61244 160 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 DSC2Q02487 901 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 CAV1Q03135 178 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 BCL2L1Q07817 233 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 KCNJ11Q14654 390 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 MORF4L2Q15014 288 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 C2orf27AQ580R0 203 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 ZNF805Q5CZA5 627 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 ZNF776Q68DI1 518 aaPredicted RBP11.38□□□□□ -0.59
FOXN3-212ENST00000556541 RANBP10Q6VN20 620 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 LEKR1Q6ZMV7 388 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 USP30Q70CQ3 517 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 B4GALNT4Q76KP1 1039 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 LRRN4Q8WUT4 740 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 RAB7BQ96AH8 199 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 SNF8Q96H20 258 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 OXNAD1Q96HP4 312 aaPredicted RBP11.38□□□□□ -0.59
FOXN3-212ENST00000556541 PPP1R16AQ96I34 528 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 TRIB3Q96RU7 358 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 LYSMD1Q96S90 227 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 HDAC8Q9BY41 377 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 FOXP3Q9BZS1 431 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 TM6SF2Q9BZW4 377 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 FOXQ1Q9C009 403 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 MFSD1Q9H3U5 465 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 ETNK1Q9HBU6 452 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 POLMQ9NP87 494 aaPredicted RBP11.38□□□□□ -0.59
FOXN3-212ENST00000556541 RRAGDQ9NQL2 400 aaPredicted RBP11.38□□□□□ -0.59
FOXN3-212ENST00000556541 RAB6BQ9NRW1 208 aa11.38□□□□□ -0.59
FOXN3-212ENST00000556541 CCDC163A0A0D9SF12 145 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 SLC7A4O43246 635 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 SEC31AO94979 1220 aaKnown RBP11.37□□□□□ -0.59
FOXN3-212ENST00000556541 PGLSO95336 258 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 NDST3O95803 873 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 FGF1P05230 155 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 TUBBP07437 444 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 CTSLP07711 333 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 HLA-EP13747 358 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 ETS1P14921 441 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 CD86P42081 329 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 GRIA4P48058 902 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 CCR3P51677 355 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 NRLP54845 237 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 SEC13P55735 322 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 WNT3AP56704 352 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 POLR2LP62875 67 aaKnown RBP11.37□□□□□ -0.59
FOXN3-212ENST00000556541 SARNPP82979 210 aaKnown RBP11.37□□□□□ -0.59
FOXN3-212ENST00000556541 SATB1Q01826 763 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 CDK18Q07002 472 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 GPS1Q13098 491 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 GAS6Q14393 721 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 IHHQ14623 411 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 ATXN7L2Q5T6C5 722 aaPredicted RBP11.37□□□□□ -0.59
FOXN3-212ENST00000556541 RNASEH2BQ5TBB1 312 aaKnown RBP11.37□□□□□ -0.59
FOXN3-212ENST00000556541 GDPD4Q6W3E5 623 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 PPP1R21Q6ZMI0 780 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 Q6ZS52 159 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 RASSF3Q86WH2 238 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 PPIL6Q8IXY8 311 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 STK40Q8N2I9 435 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 NAT8LQ8N9F0 302 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 CHST14Q8NCH0 376 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.37□□□□□ -0.59
FOXN3-212ENST00000556541 CPT1BQ92523 772 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 MRGPRX2Q96LB1 330 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 LRRC1Q9BTT6 524 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 MLPHQ9BV36 600 aaPredicted RBP11.37□□□□□ -0.59
FOXN3-212ENST00000556541 ADGRE3Q9BY15 652 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 CEP41Q9BYV8 373 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 TNKS2Q9H2K2 1166 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 SUV39H2Q9H5I1 410 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 FAM114A2Q9NRY5 505 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 EBF1Q9UH73 591 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 ASIC3Q9UHC3 531 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 EVLQ9UI08 416 aaPredicted RBP11.37□□□□□ -0.59
FOXN3-212ENST00000556541 FZD4Q9ULV1 537 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 TPX2Q9ULW0 747 aaKnown RBP11.37□□□□□ -0.59
FOXN3-212ENST00000556541 PHTF1Q9UMS5 762 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 RAI2Q9Y5P3 530 aa11.37□□□□□ -0.59
FOXN3-212ENST00000556541 KMT2EQ8IZD2 1858 aa11.36□□□□□ -0.59
FOXN3-212ENST00000556541 AP1G1O43747 822 aa11.36□□□□□ -0.59
FOXN3-212ENST00000556541 PPFIA2O75334 1257 aa11.36□□□□□ -0.59
FOXN3-212ENST00000556541 LEFTY1O75610 366 aa11.36□□□□□ -0.59
FOXN3-212ENST00000556541 ALDH1A2O94788 518 aa11.36□□□□□ -0.59
FOXN3-212ENST00000556541 MT-CYBP00156 380 aaPredicted RBP11.36□□□□□ -0.59
FOXN3-212ENST00000556541 PRLP01236 227 aa11.36□□□□□ -0.59
FOXN3-212ENST00000556541 ZSCAN5DPP0CG00 497 aa11.36□□□□□ -0.59
FOXN3-212ENST00000556541 TNFRSF8P28908 595 aa11.36□□□□□ -0.59
FOXN3-212ENST00000556541 ADCY8P40145 1251 aa11.36□□□□□ -0.59
FOXN3-212ENST00000556541 RPS14P62263 151 aaKnown RBP11.36□□□□□ -0.59
FOXN3-212ENST00000556541 ITKQ08881 620 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms