RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 RASSF2P50749 326 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 ANXA11P50995 505 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 CDH4P55283 916 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 RTP1P59025 263 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 EIF3EP60228 445 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 GMFBP60983 142 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 GNG11P61952 73 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 VSNL1P62760 191 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 XIAPP98170 497 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 MAT1AQ00266 395 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 CDK16Q00536 496 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 FLI1Q01543 452 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 GLO1Q04760 184 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 PDCLQ13371 301 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 GCKRQ14397 625 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 POU6F1Q14863 301 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 TCEA2Q15560 299 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 ME3Q16798 604 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 ZNF674Q2M3X9 581 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 SMTNL2Q2TAL5 461 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 C2orf76Q3KRA6 126 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 ZACNQ401N2 412 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 BMP2KLQ5H9B9 411 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 TOR1AIP1Q5JTV8 583 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 NKAPLQ5M9Q1 402 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 SLFN12LQ6IEE8 588 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 STYK1Q6J9G0 422 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 DPY19L2P1Q6NXN4 242 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 EMBQ6PCB8 327 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 C6orf15Q6UXA7 325 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 RBM43Q6ZSC3 357 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 RFX8Q6ZV50 586 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 TLK2Q86UE8 772 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 KRT78Q8N1N4 520 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 PRR18Q8N4B5 295 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 METTL25Q8N6Q8 603 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 EFHBQ8N7U6 833 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 OR9A1PQ8NGU1 263 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 TCP10LQ8TDR4 215 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 KLHL6Q8WZ60 621 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 GTF3AQ92664 365 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 TMEM80Q96HE8 168 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 ZBED3Q96IU2 234 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 VCPIP1Q96JH7 1222 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 FAM227BQ96M60 508 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 KREMEN1Q96MU8 473 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 LENG8Q96PV6 779 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 TRNT1Q96Q11 434 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 CCNL2Q96S94 520 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 CDK5RAP1Q96SZ6 601 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 PNKPQ96T60 521 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 CITED2Q99967 270 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 TMEM79Q9BSE2 394 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 TDRD1Q9BXT4 1180 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 IKZF4Q9H2S9 585 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 C17orf75Q9HAS0 396 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 MLXIPLQ9NP71 852 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 TIGARQ9NQ88 270 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 KCNH7Q9NS40 1196 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 RXFP3Q9NSD7 469 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 PLCXD1Q9NUJ7 323 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 DNAJC17Q9NVM6 304 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 TRNAU1APQ9NX07 287 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 TMOD3Q9NYL9 352 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 ANKMY1Q9P2S6 941 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 PSMC3IPQ9P2W1 217 aaPredicted RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 SERPINB13Q9UIV8 391 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 MID2Q9UJV3 735 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 FBXL21Q9UKT6 434 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 PCDHB10Q9UN67 800 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 PCDHA7Q9UN72 937 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 EIF3LQ9Y262 564 aaKnown RBP6.26□□□□□ -1.41
TDP1-215ENST00000556498 MSRB2Q9Y3D2 182 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 CYP46A1Q9Y6A2 500 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 SHANK2Q9UPX8 1470 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 ABCA8O94911 1581 aa6.26□□□□□ -1.41
TDP1-215ENST00000556498 UTYO14607 1347 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 TROQ12816 1431 aaPredicted RBP6.25□□□□□ -1.41
TDP1-215ENST00000556498 YTHDC2Q9H6S0 1430 aaKnown RBP6.25□□□□□ -1.41
TDP1-215ENST00000556498 RAPGEF6Q8TEU7 1601 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 A0A1W2PRG0 241 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 A0A1W2PRG6 482 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 A8MXE2 369 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 EYA2O00167 538 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 RNF103O00237 685 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 CCRL2O00421 344 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 CACNG3O60359 315 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 BCAS1O75363 584 aaPredicted RBP6.25□□□□□ -1.41
TDP1-215ENST00000556498 CRCPO75575 148 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 DDAH1O94760 285 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 TMEM63AO94886 807 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 GJB6O95452 261 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 NSA2O95478 260 aaKnown RBP6.25□□□□□ -1.41
TDP1-215ENST00000556498 F13BP05160 661 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 GJB1P08034 283 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 FGF4P08620 206 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 CYP21A2P08686 494 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 ZCCHC18P0CG32 403 aa6.25□□□□□ -1.41
TDP1-215ENST00000556498 DBTP11182 482 aaKnown RBP6.25□□□□□ -1.41
TDP1-215ENST00000556498 CCDC130P13994 396 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms