RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 VSIG1Q86XK7 387 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 CAMK1DQ8IU85 385 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 BBS5Q8N3I7 341 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 PGBD5Q8N414 524 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 TPCN2Q8NHX9 752 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-217ENST00000556203 SKA1Q96BD8 255 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 FEM1CQ96JP0 617 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 ZNF641Q96N77 438 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-217ENST00000556203 MYOCQ99972 504 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 MAK16Q9BXY0 300 aaKnown RBP15.36■□□□□ 0.05
ACTN1-217ENST00000556203 LACRTQ9GZZ8 138 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 SUV39H2Q9H5I1 410 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 ATP13A3Q9H7F0 1226 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 GGT7Q9UJ14 662 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 CA5BQ9Y2D0 317 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 DUSP10Q9Y6W6 482 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 CEP250Q9BV73 2442 aa15.36■□□□□ 0.05
ACTN1-217ENST00000556203 TSPAN11A1L157 253 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 TTC24A2A3L6 582 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-217ENST00000556203 BTNL10A8MVZ5 291 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 APOL1O14791 398 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 AREL1O15033 823 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 SPINT1O43278 529 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 TSPAN6O43657 245 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 MX2P20592 715 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 SERPINA4P29622 427 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 HSPA9P38646 679 aaKnown RBP15.35■□□□□ 0.05
ACTN1-217ENST00000556203 MMP13P45452 471 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 VAV2P52735 878 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 MAXP61244 160 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 AP1S1P61966 158 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 BCL2L1Q07817 233 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 SLC10A2Q12908 348 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-217ENST00000556203 FGL2Q14314 439 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 STAT4Q14765 748 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 IFI16Q16666 785 aaKnown RBP15.35■□□□□ 0.05
ACTN1-217ENST00000556203 TMEM259Q4ZIN3 620 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 MARC1Q5VT66 337 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 TIGD7Q6NT04 549 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-217ENST00000556203 DAAM2Q86T65 1068 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 RFX6Q8HWS3 928 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 PLD5Q8N7P1 536 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 TMEM145Q8NBT3 493 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 HCAR2Q8TDS4 363 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 LRRN4Q8WUT4 740 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 MGME1Q9BQP7 344 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 DESI2Q9BSY9 194 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 FZD3Q9NPG1 666 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 DTLQ9NZJ0 730 aa15.35■□□□□ 0.05
ACTN1-217ENST00000556203 FNDC3AQ9Y2H6 1198 aaKnown RBP15.35■□□□□ 0.05
ACTN1-217ENST00000556203 IGLON5A6NGN9 336 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 KCNK3O14649 394 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 ITIH2P19823 946 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 CR2P20023 1033 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 HNRNPA2B1P22626 353 aaKnown RBP15.34■□□□□ 0.05
ACTN1-217ENST00000556203 AKT2P31751 481 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 CTSKP43235 329 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 GSDMDP57764 484 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 UGP2Q16851 508 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 PPM1JQ5JR12 505 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 SLC9A4Q6AI14 798 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 BRAT1Q6PJG6 821 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 MFSD7Q6UXD7 560 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 ERMP1Q7Z2K6 904 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 ZSCAN30Q86W11 494 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 ZSWIM9Q86XI8 627 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 TEX26Q8N6G2 289 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 PAF1Q8N7H5 531 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 MFSD2AQ8NA29 543 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 CALR3Q96L12 384 aaKnown RBP15.34■□□□□ 0.05
ACTN1-217ENST00000556203 NSMCE3Q96MG7 304 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 ZNF830Q96NB3 372 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-217ENST00000556203 NUDCD1Q96RS6 583 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 SCUBE2Q9NQ36 999 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 HEY1Q9Y5J3 304 aa15.34■□□□□ 0.05
ACTN1-217ENST00000556203 UPK3BL1B0FP48 263 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 UPK3BL2E5RIL1 263 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 H0Y8X5 98 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 TLR4O00206 839 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 MATN3O15232 486 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 PJA2O43164 708 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 PAK4O96013 591 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-217ENST00000556203 PRKCGP05129 697 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 CD59P13987 128 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 ZFXP17010 805 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-217ENST00000556203 CCNCP24863 283 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 CDKN2BP42772 138 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 MARCKSL1P49006 195 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 NOVA1P51513 510 aaKnown RBP15.33■□□□□ 0.04
ACTN1-217ENST00000556203 SUOXP51687 545 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 DYNLT1P63172 113 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 SGCGQ13326 291 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 SLC14A1Q13336 389 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 HNRNPDQ14103 355 aaKnown RBP15.33■□□□□ 0.04
ACTN1-217ENST00000556203 KATNAL2Q8IYT4 538 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 CCNYQ8ND76 341 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 CXorf40AQ8TE69 158 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 MAML1Q92585 1016 aa15.33■□□□□ 0.04
ACTN1-217ENST00000556203 KRT35Q92764 455 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms