RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 COPAP53621 1224 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 WNT3AP56704 352 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 SATB1Q01826 763 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 CDK18Q07002 472 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 MTAPQ13126 283 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 ZNF805Q5CZA5 627 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 DUPD1Q68J44 220 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 PKN3Q6P5Z2 889 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 BRAT1Q6PJG6 821 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 KDELC1Q6UW63 502 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 TMEM92Q6UXU6 159 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 LINC00523Q86TU6 105 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 TMPRSS6Q8IU80 811 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 CAMK1DQ8IU85 385 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 CAMKK1Q8N5S9 505 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 OR6K2Q8NGY2 324 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 PIP4K2CQ8TBX8 421 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 VOPP1Q96AW1 172 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 ECHDC3Q96DC8 303 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 OXNAD1Q96HP4 312 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 PPP1R16AQ96I34 528 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 ADGRE3Q9BY15 652 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 LRRC40Q9H9A6 602 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 RRAGDQ9NQL2 400 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 EIF2B3Q9NR50 452 aaKnown RBP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 TPX2Q9ULW0 747 aaKnown RBP12.59□□□□□ -0.39
SHMT2-221ENST00000555773 PCDHGC4Q9Y5F7 938 aa12.59□□□□□ -0.39
SHMT2-221ENST00000555773 MYO18AQ92614 2054 aaKnown RBP12.58□□□□□ -0.39
SHMT2-221ENST00000555773 KIAA1549LQ6ZVL6 1849 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 LOC285095A0A1B0GVY8 99 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 AP3B1O00203 1094 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 FZD6O60353 706 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 PMPCBO75439 489 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 TECTAO75443 2155 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 GJB3O75712 270 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 SUN1O94901 812 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 AP2A1O95782 977 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 MT-CYBP00156 380 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-221ENST00000555773 IL1BP01584 269 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 UGT2B4P06133 528 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 CTSLP07711 333 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 APRTP07741 180 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 C5AR1P21730 350 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 NFKBIAP25963 317 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 IVDP26440 423 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 GKP32189 559 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 SLC8A1P32418 973 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 LMAN1P49257 510 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 VPS41P49754 854 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 SUOXP51687 545 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 RPS14P62263 151 aaKnown RBP12.58□□□□□ -0.4
SHMT2-221ENST00000555773 BASP1P80723 227 aaKnown RBP12.58□□□□□ -0.4
SHMT2-221ENST00000555773 SARNPP82979 210 aaKnown RBP12.58□□□□□ -0.4
SHMT2-221ENST00000555773 IHHQ14623 411 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 CST6Q15828 149 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 FAM182AQ5T1J6 154 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 CFAP58Q5T655 872 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 ARMC12Q5T9G4 340 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 KCTD11Q693B1 232 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 NAPEPLDQ6IQ20 393 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 RANBP10Q6VN20 620 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 MMAAQ8IVH4 418 aaKnown RBP12.58□□□□□ -0.4
SHMT2-221ENST00000555773 PPIL6Q8IXY8 311 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 NDUFAF2Q8N183 169 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 TSTD1Q8NFU3 115 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 PRCCQ92733 491 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-221ENST00000555773 SIPA1Q96FS4 1042 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 IFT43Q96FT9 208 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 FEM1CQ96JP0 617 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 NSMCE3Q96MG7 304 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 KLHL32Q96NJ5 620 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 GORASP1Q9BQQ3 440 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 MLPHQ9BV36 600 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-221ENST00000555773 TDRD1Q9BXT4 1180 aaKnown RBP12.58□□□□□ -0.4
SHMT2-221ENST00000555773 MKRN2Q9H000 416 aaKnown RBP12.58□□□□□ -0.4
SHMT2-221ENST00000555773 DYRK4Q9NR20 520 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 UBP1Q9NZI7 540 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 TRIOO75962 3097 aa12.58□□□□□ -0.4
SHMT2-221ENST00000555773 NYNRINQ9P2P1 1898 aaKnown RBP12.57□□□□□ -0.4
SHMT2-221ENST00000555773 TCRBV21S2A2A0A5A6 115 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 TSPAN11A1L157 253 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 C16orf96A6NNT2 1141 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 KPNA3O00505 521 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-221ENST00000555773 DNALI1O14645 258 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-221ENST00000555773 PGLSO95336 258 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 PIGNO95427 931 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 APBB3O95704 486 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 NDST3O95803 873 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 PRLP01236 227 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 DNTTP04053 509 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 TPSB2P20231 275 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 ITGB7P26010 798 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 HOXA6P31267 233 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 ADRA1AP35348 466 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 TRAF2Q12933 501 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 TPSAB1Q15661 275 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 FAXCQ5TGI0 409 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 HOOK3Q86VS8 718 aa12.57□□□□□ -0.4
SHMT2-221ENST00000555773 FBXL6Q8N531 539 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms