RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 ZNF135P52742 658 aaPredicted RBP13.98□□□□□ -0.17
PCNX4-209ENST00000555569 UBASH3AP57075 661 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 PROX2Q3B8N5 592 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 HS1BP3Q53T59 392 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 PPP6R3Q5H9R7 873 aaPredicted RBP13.98□□□□□ -0.17
PCNX4-209ENST00000555569 LRRC73Q5JTD7 316 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 RFX8Q6ZV50 586 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 CYP4V2Q6ZWL3 525 aaPredicted RBP13.98□□□□□ -0.17
PCNX4-209ENST00000555569 TMPRSS12Q86WS5 348 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 PSTKQ8IV42 348 aaKnown RBP13.98□□□□□ -0.17
PCNX4-209ENST00000555569 SLC25A45Q8N413 288 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 MDM1Q8TC05 714 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 CXorf40AQ8TE69 158 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 EXOC2Q96KP1 924 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 KLF6Q99612 283 aaPredicted RBP13.98□□□□□ -0.17
PCNX4-209ENST00000555569 PDFQ9HBH1 243 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 UCKL1Q9NWZ5 548 aa13.98□□□□□ -0.17
PCNX4-209ENST00000555569 BZW2Q9Y6E2 419 aaKnown RBP13.98□□□□□ -0.17
PCNX4-209ENST00000555569 SPTY2D1-AS1A0A0U1RR47 76 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 GOLGA6L19H0YKK7 550 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 SIGLEC6O43699 453 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 PIGNO95427 931 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 XPAP23025 273 aaPredicted RBP13.97□□□□□ -0.17
PCNX4-209ENST00000555569 PAPOLAP51003 745 aaKnown RBP13.97□□□□□ -0.17
PCNX4-209ENST00000555569 HNRNPKP61978 463 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCNX4-209ENST00000555569 ZNF211Q13398 564 aaPredicted RBP13.97□□□□□ -0.17
PCNX4-209ENST00000555569 ILKQ13418 452 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 CAMK2BQ13554 666 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 FZD2Q14332 565 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 GRM3Q14832 879 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 ACAP1Q15027 740 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 ZNF542PQ5EBM4 170 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 AFMIDQ63HM1 303 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 HGSNATQ68CP4 663 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 VPS36Q86VN1 386 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 ARHGAP12Q8IWW6 846 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 OR4C6Q8NH72 309 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 SYN2Q92777 582 aaPredicted RBP13.97□□□□□ -0.17
PCNX4-209ENST00000555569 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.97□□□□□ -0.17
PCNX4-209ENST00000555569 CAAP1Q9H8G2 361 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 DNAJC28Q9NX36 388 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 IPO11Q9UI26 975 aaKnown RBP13.97□□□□□ -0.17
PCNX4-209ENST00000555569 URB1O60287 2271 aaKnown RBP13.97□□□□□ -0.17
PCNX4-209ENST00000555569 WDFY3Q8IZQ1 3526 aa13.97□□□□□ -0.17
PCNX4-209ENST00000555569 TRABD2BA6NFA1 517 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 FFAR2O15552 330 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 MMP20O60882 483 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 TM7SF2O76062 418 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 SERPING1P05155 500 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 ALPPL2P10696 532 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 JUPP14923 745 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 ITIH2P19823 946 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 PTMSP20962 102 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 ACP1P24666 158 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 PCK1P35558 622 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 HNF1BP35680 557 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 HCAR3P49019 387 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 SUOXP51687 545 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 PFN3P60673 137 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 ZBED6P86452 979 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 DAB2P98082 770 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 HES3Q5TGS1 186 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 PARGQ86W56 976 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 PDCD7Q8N8D1 485 aaKnown RBP13.96□□□□□ -0.17
PCNX4-209ENST00000555569 HCAR2Q8TDS4 363 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 CPLX3Q8WVH0 158 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 CENPTQ96BT3 561 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 IQCDQ96DY2 449 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 C1QTNF7Q9BXJ2 289 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 SUV39H2Q9H5I1 410 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 ZWILCHQ9H900 591 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 SP110Q9HB58 689 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 CWC15Q9P013 229 aaKnown RBP13.96□□□□□ -0.17
PCNX4-209ENST00000555569 CAPN11Q9UMQ6 739 aa13.96□□□□□ -0.17
PCNX4-209ENST00000555569 SHROOM3Q8TF72 1996 aa13.96□□□□□ -0.18
PCNX4-209ENST00000555569 ZFYVE26Q68DK2 2539 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 FREM2Q5SZK8 3169 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 TSPAN11A1L157 253 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 NEMP2A6NFY4 417 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 H3BM21 787 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 H3BRJ5 948 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 DFFAO00273 331 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 PALMO75781 387 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 CSF2P04141 144 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 NME1P15531 152 aaKnown RBP13.95□□□□□ -0.18
PCNX4-209ENST00000555569 IL1R2P27930 398 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 IGFALSP35858 605 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 CSNK1DP48730 415 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 CLDN6P56747 220 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 IL10RBQ08334 325 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 CYP4F3Q08477 520 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 ELP6Q0PNE2 266 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 DPYSQ14117 519 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 PDE1CQ14123 709 aaPredicted RBP13.95□□□□□ -0.18
PCNX4-209ENST00000555569 RFTN1Q14699 578 aaPredicted RBP13.95□□□□□ -0.18
PCNX4-209ENST00000555569 TMEM52BQ4KMG9 183 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 CFAP58Q5T655 872 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 SRLQ86TD4 932 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 LZTR1Q8N653 840 aa13.95□□□□□ -0.18
PCNX4-209ENST00000555569 NPWQ8N729 165 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms