RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 PPP1R16AQ96I34 528 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 PCMTD1Q96MG8 357 aaPredicted RBP10.99□□□□□ -0.65
TDP1-212ENST00000555565 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 ERGIC2Q96RQ1 377 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 SEMA3CQ99985 751 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 HEPHQ9BQS7 1158 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 TM6SF2Q9BZW4 377 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 ABCG4Q9H172 646 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 RETREG1Q9H6L5 497 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 USP29Q9HBJ7 922 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 FZD3Q9NPG1 666 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 TMEM248Q9NWD8 314 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 DNAI1Q9UI46 699 aa10.99□□□□□ -0.65
TDP1-212ENST00000555565 ATXN7L1Q9ULK2 861 aaPredicted RBP10.99□□□□□ -0.65
TDP1-212ENST00000555565 HEMK1Q9Y5R4 338 aaPredicted RBP10.99□□□□□ -0.65
TDP1-212ENST00000555565 LRRK2Q5S007 2527 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 CXorf51AA0A1B0GTR3 108 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 TCRBV5S1A1TA0A578 114 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 SIGLEC16A6NMB1 481 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 CALB1P05937 261 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 GP1BBP13224 206 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 ADRB3P13945 408 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 HNRNPA2B1P22626 353 aaKnown RBP10.98□□□□□ -0.65
TDP1-212ENST00000555565 ITGB7P26010 798 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 AKT2P31751 481 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 L1CAMP32004 1257 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 GKP32189 559 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 ETFBP38117 255 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 DUSP3P51452 185 aaPredicted RBP10.98□□□□□ -0.65
TDP1-212ENST00000555565 CLDN2P57739 230 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 UBXN1Q04323 297 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 SRSF6Q13247 344 aaKnown RBP10.98□□□□□ -0.65
TDP1-212ENST00000555565 UBAP2LQ14157 1087 aaKnown RBP10.98□□□□□ -0.65
TDP1-212ENST00000555565 FGL2Q14314 439 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 ZNF542PQ5EBM4 170 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 C6orf132Q5T0Z8 1188 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 LEKR1Q6ZMV7 388 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 GCNT7Q6ZNI0 430 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 MON1BQ7L1V2 547 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 PARS2Q7L3T8 475 aaKnown RBP10.98□□□□□ -0.65
TDP1-212ENST00000555565 ABI3BPQ7Z7G0 1075 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 PLPP6Q8IY26 295 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 PYROXD2Q8N2H3 581 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 ANKRD20A12PQ8NF67 263 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 EXTL1Q92935 676 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 NTAN1Q96AB6 310 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 ISG20Q96AZ6 181 aaKnown RBP10.98□□□□□ -0.65
TDP1-212ENST00000555565 TBC1D31Q96DN5 1066 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 SELENOOQ9BVL4 669 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 MAGEH1Q9H213 219 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 GPR27Q9NS67 375 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 HECAQ9UBI9 543 aaPredicted RBP10.98□□□□□ -0.65
TDP1-212ENST00000555565 FADS3Q9Y5Q0 445 aa10.98□□□□□ -0.65
TDP1-212ENST00000555565 KIF26BQ2KJY2 2108 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 EME2A4GXA9 379 aaPredicted RBP10.97□□□□□ -0.65
TDP1-212ENST00000555565 CCP110O43303 1012 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 AP1G1O43747 822 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 RAMP2O60895 175 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 TNFSF15O95150 251 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 ITGB2P05107 769 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 FAM87AP0C7U9 286 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 ATP1A3P13637 1013 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 GPD1P21695 349 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 RPS21P63220 83 aaKnown RBP10.97□□□□□ -0.65
TDP1-212ENST00000555565 TGIF1Q15583 401 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 CDKN3Q16667 212 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 ZSCAN23Q3MJ62 389 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 HS1BP3Q53T59 392 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 GUSBP11Q6P575 273 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 SLFN11Q7Z7L1 901 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 OR2AP1Q8NGE2 309 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 OR6K2Q8NGY2 324 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 IFT43Q96FT9 208 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 BMFQ96LC9 184 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 AGPAT1Q99943 283 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 CALN1Q9BXU9 219 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 SLC17A9Q9BYT1 436 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 NOL6Q9H6R4 1146 aaKnown RBP10.97□□□□□ -0.65
TDP1-212ENST00000555565 ZDHHC6Q9H6R6 413 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 SEPT11Q9NVA2 429 aaKnown RBP10.97□□□□□ -0.65
TDP1-212ENST00000555565 KLF15Q9UIH9 416 aa10.97□□□□□ -0.65
TDP1-212ENST00000555565 USP9YO00507 2555 aaPredicted RBP10.96□□□□□ -0.65
TDP1-212ENST00000555565 POM121BA6NF01 834 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 C16orf96A6NNT2 1141 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 A6NNZ2 444 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 KRIT1O00522 736 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 RAD51BO15315 384 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 SPINT1O43278 529 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 KDELR3O43731 214 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 PAK4O96013 591 aaPredicted RBP10.96□□□□□ -0.65
TDP1-212ENST00000555565 GSRP00390 522 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 ALPPL2P10696 532 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 CDK11BP21127 795 aaKnown RBP10.96□□□□□ -0.65
TDP1-212ENST00000555565 EPHB2P29323 1055 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 MLLT3P42568 568 aaPredicted RBP10.96□□□□□ -0.65
TDP1-212ENST00000555565 ABL2P42684 1182 aa10.96□□□□□ -0.65
TDP1-212ENST00000555565 ZNF143P52747 638 aaPredicted RBP10.96□□□□□ -0.65
TDP1-212ENST00000555565 GEMIN4P57678 1058 aaKnown RBP10.96□□□□□ -0.65
TDP1-212ENST00000555565 RPL7AP62424 266 aaKnown RBP10.96□□□□□ -0.65
TDP1-212ENST00000555565 TLE1Q04724 770 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms