RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 TMPRSS12Q86WS5 348 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 LRRC49Q8IUZ0 686 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 ARHGAP12Q8IWW6 846 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 CACTIN-AS1Q8N1I8 211 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 EID2Q8N6I1 236 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 PNPLA1Q8N8W4 532 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 OR13H1Q8NG92 308 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 OR6K2Q8NGY2 324 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 KLK6Q92876 244 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 CNDP2Q96KP4 475 aaKnown RBP11.98□□□□□ -0.49
VRK1-204ENST00000555351 TBATAQ96M53 351 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.98□□□□□ -0.49
VRK1-204ENST00000555351 SLC39A8Q9C0K1 460 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 SUV39H2Q9H5I1 410 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 CWC15Q9P013 229 aaKnown RBP11.98□□□□□ -0.49
VRK1-204ENST00000555351 MYO1AQ9UBC5 1043 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 DKK4Q9UBT3 224 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 NENFQ9UMX5 172 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 TRPM6Q9BX84 2022 aa11.98□□□□□ -0.49
VRK1-204ENST00000555351 NEMP2A6NFY4 417 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 IGLON5A6NGN9 336 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 J3KR12 359 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 MYO1FO00160 1098 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 RFPL3O75679 317 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 PALMO75781 387 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 PIAS2O75928 621 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 TIMP2P16035 220 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 CKMT2P17540 419 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 DGKAP23743 735 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 ACP1P24666 158 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 IL1R2P27930 398 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 HSPA9P38646 679 aaKnown RBP11.97□□□□□ -0.49
VRK1-204ENST00000555351 ACADVLP49748 655 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 RENBPP51606 427 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 PFN3P60673 137 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 HNRNPKP61978 463 aaKnown RBP eCLIP11.97□□□□□ -0.49
VRK1-204ENST00000555351 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 RALGPS1Q5JS13 557 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 SPECC1LQ69YQ0 1117 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 LEKR1Q6ZMV7 388 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 Q6ZSR6 202 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 POLNQ7Z5Q5 900 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 SLC22A18ASQ8N1D0 253 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 SLC25A45Q8N413 288 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 OR4C6Q8NH72 309 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 FAM71BQ8TC56 605 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 CPLX3Q8WVH0 158 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 CENPTQ96BT3 561 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 PSKH2Q96QS6 385 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 DNAJC7Q99615 494 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 DUSP23Q9BVJ7 150 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 CALN1Q9BXU9 219 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 XPO4Q9C0E2 1151 aaKnown RBP11.97□□□□□ -0.49
VRK1-204ENST00000555351 THAP2Q9H0W7 228 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 ATP13A3Q9H7F0 1226 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 USP29Q9HBJ7 922 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 FZD3Q9NPG1 666 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 UVRAGQ9P2Y5 699 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 CA5BQ9Y2D0 317 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 CSNK1G3Q9Y6M4 447 aa11.97□□□□□ -0.49
VRK1-204ENST00000555351 DOCK9Q9BZ29 2069 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 A0A1W2PQ67 120 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 SSU72P8A0A1W2PR75 194 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 POM121BA6NF01 834 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 H3BM21 787 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 RAD51BO15315 384 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 TM7SF2O76062 418 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 CSF2P04141 144 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 ALPPL2P10696 532 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 SERPINA4P29622 427 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 CASP14P31944 242 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 SERPINB6P35237 376 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 CLDN2P57739 230 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 AP1S1P61966 158 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 POLR2LP62875 67 aaKnown RBP11.96□□□□□ -0.49
VRK1-204ENST00000555351 SLC25A11Q02978 314 aaKnown RBP11.96□□□□□ -0.49
VRK1-204ENST00000555351 PTK2BQ14289 1009 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 FZD2Q14332 565 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 SLC18A3Q16572 532 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 HADHQ16836 314 aaKnown RBP11.96□□□□□ -0.49
VRK1-204ENST00000555351 UGP2Q16851 508 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 PROX2Q3B8N5 592 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 CCDC122Q5T0U0 273 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 ERAP2Q6P179 960 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 TMCO3Q6UWJ1 677 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 PTAR1Q7Z6K3 402 aaPredicted RBP11.96□□□□□ -0.49
VRK1-204ENST00000555351 SRLQ86TD4 932 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 PARGQ86W56 976 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 FAM181AQ8N9Y4 354 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 OR8K1Q8NGG5 319 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 CXorf40AQ8TE69 158 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 BTN2A2Q8WVV5 523 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 ZCCHC14Q8WYQ9 949 aaKnown RBP11.96□□□□□ -0.49
VRK1-204ENST00000555351 RFFLQ8WZ73 363 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 ECHDC3Q96DC8 303 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 CELF6Q96J87 481 aaKnown RBP11.96□□□□□ -0.49
VRK1-204ENST00000555351 MYOCQ99972 504 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 NUP85Q9BW27 656 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 SP110Q9HB58 689 aa11.96□□□□□ -0.49
VRK1-204ENST00000555351 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms