RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 IFT81Q8WYA0 676 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 NUP205Q92621 2012 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 ART4Q93070 314 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 RTP4Q96DX8 246 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 EXOC2Q96KP1 924 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 QKIQ96PU8 341 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 PSKH2Q96QS6 385 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 TUBGCP5Q96RT8 1024 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 LGMNQ99538 433 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 OMDQ99983 421 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 OSBPL1AQ9BXW6 950 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 DPH5Q9H2P9 285 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 PABPC3Q9H361 631 aaKnown RBP11.05□□□□□ -0.64
SHMT2-218ENST00000555213 LHX3Q9UBR4 397 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 NFU1Q9UMS0 254 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 TTLL3Q9Y4R7 772 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 ACTL7AQ9Y615 435 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 CHD5Q8TDI0 1954 aa11.05□□□□□ -0.64
SHMT2-218ENST00000555213 CKAP5Q14008 2032 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 H0Y858 1186 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 H7C0C1 242 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 KPNA3O00505 521 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 MAP3K13O43283 966 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 RNASEH2AO75792 299 aaKnown RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 SEC31AO94979 1220 aaKnown RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 CA4P22748 312 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 SERPINA4P29622 427 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 STIP1P31948 543 aaKnown RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 SLC8A1P32418 973 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 ATP5OP48047 213 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 IFI35P80217 286 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 ITKQ08881 620 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 NSUN2Q08J23 767 aaKnown RBP eCLIP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 DMWDQ09019 674 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 SLC10A7Q0GE19 358 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 PRKD1Q15139 912 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 CYTH1Q15438 398 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 MYLK3Q32MK0 819 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 SLC45A4Q5BKX6 768 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 RALGPS1Q5JS13 557 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 ATXN7L2Q5T6C5 722 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 CCDC70Q6NSX1 233 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 USP30Q70CQ3 517 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 CEP68Q76N32 757 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 FAM71DQ8N9W8 422 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 ZBTB44Q8NCP5 570 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 OR6K2Q8NGY2 324 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 PIP4K2CQ8TBX8 421 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 GAB3Q8WWW8 586 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 MAML1Q92585 1016 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 NELL1Q92832 810 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 ATOH1Q92858 354 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 FAM129BQ96TA1 746 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 MGME1Q9BQP7 344 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 TXLNGYQ9BZA5 131 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 TRIM31Q9BZY9 425 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 POLR1EQ9GZS1 481 aaKnown RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 SLC6A17Q9H1V8 727 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 ATP13A3Q9H7F0 1226 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 SEPT10Q9P0V9 454 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 USP36Q9P275 1121 aaKnown RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 PPM1HQ9ULR3 514 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 CYP8B1Q9UNU6 501 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 UTP11Q9Y3A2 253 aaKnown RBP11.04□□□□□ -0.64
SHMT2-218ENST00000555213 TRIOO75962 3097 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 MUC6Q6W4X9 2439 aa11.04□□□□□ -0.64
SHMT2-218ENST00000555213 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-218ENST00000555213 KCNK1O00180 336 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 MID1O15344 667 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 SLC7A4O43246 635 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 ZNF821O75541 412 aaPredicted RBP11.03□□□□□ -0.64
SHMT2-218ENST00000555213 GCATO75600 419 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 LEFTY1O75610 366 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 PEX11BO96011 259 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 C7P10643 843 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 ITIH2P19823 946 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 CES1P23141 567 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 ITGB7P26010 798 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 CSNK1DP48730 415 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 SCNN1BP51168 640 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 TPMTP51580 245 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 LMNB2Q03252 620 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 TCF15Q12870 199 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 CUL1Q13616 776 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 DARS2Q6PI48 645 aaKnown RBP11.03□□□□□ -0.64
SHMT2-218ENST00000555213 SLC36A4Q6YBV0 504 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 SRLQ86TD4 932 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 TEX26Q8N6G2 289 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 TSEN2Q8NCE0 465 aaKnown RBP11.03□□□□□ -0.64
SHMT2-218ENST00000555213 CHST14Q8NCH0 376 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 GRK7Q8WTQ7 553 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 NUDCD1Q96RS6 583 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 VAT1Q99536 393 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 CPEB1Q9BZB8 566 aaKnown RBP11.03□□□□□ -0.64
SHMT2-218ENST00000555213 RAB17Q9H0T7 212 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 NT5MQ9NPB1 228 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 SCUBE2Q9NQ36 999 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 ITM2CQ9NQX7 267 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 FAM114A2Q9NRY5 505 aa11.03□□□□□ -0.64
SHMT2-218ENST00000555213 RBM22Q9NW64 420 aaKnown RBP eCLIP11.03□□□□□ -0.641e-9■■■■□ 20
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms