RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 PRPF39Q86UA1 669 aaKnown RBP16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 CTAGE6Q86UF2 777 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 CTAGE4Q8IX94 777 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 KLHL7Q8IXQ5 586 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 OR6K2Q8NGY2 324 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 GRIN3AQ8TCU5 1115 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 LRRC45Q96CN5 670 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 ECHDC3Q96DC8 303 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 C2orf42Q9NWW7 574 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 FBXO4Q9UKT5 387 aa16.61■□□□□ 0.25
SPTLC2-203ENST00000554901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 TSPAN11A1L157 253 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 ERI2A8K979 691 aaKnown RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 K7ESF4 209 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 KPNA3O00505 521 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 TRAFD1O14545 582 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 PSMD3O43242 534 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 EPOP01588 193 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 KRT14P02533 472 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 UGT2B4P06133 528 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 PSMB4P28070 264 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 SLC8A1P32418 973 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 RPL22P35268 128 aaKnown RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 RPL26P61254 145 aaKnown RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 POLR2LP62875 67 aaKnown RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 TMEM31Q5JXX7 168 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 KBTBD6Q86V97 674 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 CAMK1DQ8IU85 385 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 RBM15Q96T37 977 aaKnown RBP eCLIP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 KRT12Q99456 494 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 HDAC8Q9BY41 377 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 PABPC3Q9H361 631 aaKnown RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 DYRK4Q9NR20 520 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 POLR3BQ9NW08 1133 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 SARDHQ9UL12 918 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 RPL26L1Q9UNX3 145 aaKnown RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 RAI2Q9Y5P3 530 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 FAM187AA6NFU0 413 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 ZNF217O75362 1048 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 ACADMP11310 421 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 GKP32189 559 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 PTGIRP43119 386 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 PSMD8P48556 350 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 SEMA5AQ13591 1074 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 PTK6Q13882 451 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 PPP1R7Q15435 360 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 CFAP58Q5T655 872 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 ANO7Q6IWH7 933 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 GLIS1Q8NBF1 620 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 MDGA1Q8NFP4 955 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 HMGB4Q8WW32 186 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 FAM131CQ96AQ9 280 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 KLHL32Q96NJ5 620 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 HHIPQ96QV1 700 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 TDRD1Q9BXT4 1180 aaKnown RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 FAM126AQ9BYI3 521 aaPredicted RBP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 BCCIPQ9P287 314 aaKnown RBP eCLIP16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 FZD4Q9ULV1 537 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 PCDHGC4Q9Y5F7 938 aa16.6■□□□□ 0.25
SPTLC2-203ENST00000554901 SLC7A4O43246 635 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 FZD6O60353 706 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 GJB3O75712 270 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 PIGNO95427 931 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 METTL18O95568 372 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 IGLV3-19P01714 112 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 ETS1P14921 441 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 NFKBIAP25963 317 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 TNNT3P45378 269 aaPredicted RBP16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 C2orf54Q08AI8 447 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 TRAF2Q12933 501 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 IHHQ14623 411 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 ARMC12Q5T9G4 340 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 KDELC1Q6UW63 502 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 JAMLQ86YT9 394 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 MMGT1Q8N4V1 131 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 SPATA22Q8NHS9 363 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 RAB7BQ96AH8 199 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 OXNAD1Q96HP4 312 aaPredicted RBP16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 FEM1CQ96JP0 617 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 NSMCE3Q96MG7 304 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 ADGRE3Q9BY15 652 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 ITM2CQ9NQX7 267 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 RAB6BQ9NRW1 208 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 USP36Q9P275 1121 aaKnown RBP16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 NCKAP1Q9Y2A7 1128 aa16.59■□□□□ 0.25
SPTLC2-203ENST00000554901 TTC24A2A3L6 582 aaPredicted RBP16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 FAM86C2PA6NEL3 165 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 MID1O15344 667 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 PGLSO95336 258 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 MT-CYBP00156 380 aaPredicted RBP16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 ZSCAN5DPP0CG00 497 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 NEK3P51956 506 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 WNT3AP56704 352 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 CDK16Q00536 496 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 CDK18Q07002 472 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 KCTD11Q693B1 232 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 KIAA1324Q6UXG2 1013 aaKnown RBP16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 ERN2Q76MJ5 926 aaKnown RBP16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 NDUFAF2Q8N183 169 aa16.58■□□□□ 0.24
SPTLC2-203ENST00000554901 PGBD3Q8N328 593 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms