RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 TFAP2DQ7Z6R9 452 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 MON1AQ86VX9 555 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 TMEM126BQ8IUX1 230 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 TBC1D21Q8IYX1 336 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 PTGR2Q8N8N7 351 aaPredicted RBP3.93□□□□□ -1.78
KTN1-217ENST00000554831 DQX1Q8TE96 717 aaKnown RBP3.93□□□□□ -1.78
KTN1-217ENST00000554831 TRPC4APQ8TEL6 797 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 SNRNP27Q8WVK2 155 aaKnown RBP3.93□□□□□ -1.78
KTN1-217ENST00000554831 HIST1H2AHQ96KK5 128 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 RNF145Q96MT1 663 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 FCRL5Q96RD9 977 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 SEPHS2Q99611 448 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 HIST1H2AJQ99878 128 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 H2AFJQ9BTM1 129 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 POLR1EQ9GZS1 481 aaKnown RBP3.93□□□□□ -1.78
KTN1-217ENST00000554831 GBA3Q9H227 469 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 ALG9Q9H6U8 611 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 POLR1BQ9H9Y6 1135 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 PTPRHQ9HD43 1115 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 TIMMDC1Q9NPL8 285 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 SCN3BQ9NY72 215 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.93□□□□□ -1.78
KTN1-217ENST00000554831 RBPJLQ9UBG7 517 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 TUBGCP4Q9UGJ1 667 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 DMTF1Q9Y222 760 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 CRYL1Q9Y2S2 319 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 NR2E3Q9Y5X4 410 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 ANKRD36CQ5JPF3 1778 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 CLDN5O00501 218 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 KPNA6O60684 536 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 H6PDO95479 791 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 CHRNGP07510 517 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 SOX11P35716 441 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 TMED10P49755 219 aaKnown RBP3.93□□□□□ -1.78
KTN1-217ENST00000554831 CLK1P49759 484 aaKnown RBP3.93□□□□□ -1.78
KTN1-217ENST00000554831 CLCN2P51788 898 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 ATP6V0D1P61421 351 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 MTA1Q13330 715 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 ADGRE1Q14246 886 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 CAPRIN1Q14444 709 aaKnown RBP3.93□□□□□ -1.78
KTN1-217ENST00000554831 GPR162Q16538 588 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 CTC1Q2NKJ3 1217 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 CUZD1Q86UP6 607 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 HERC6Q8IVU3 1022 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 NKAPQ8N5F7 415 aaKnown RBP3.93□□□□□ -1.78
KTN1-217ENST00000554831 VPS37AQ8NEZ2 397 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 OR52K2Q8NGK3 314 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 TRPM4Q8TD43 1214 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 STYXQ8WUJ0 223 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 FAM136AQ96C01 138 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 ZFP42Q96MM3 310 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 AGAP2Q99490 1192 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 GPR63Q9BZJ6 419 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 HAPLN2Q9GZV7 340 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 GDAP2Q9NXN4 497 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 LEF1Q9UJU2 399 aaPredicted RBP3.93□□□□□ -1.78
KTN1-217ENST00000554831 FADS3Q9Y5Q0 445 aa3.93□□□□□ -1.78
KTN1-217ENST00000554831 SF3B1O75533 1304 aaKnown RBP eCLIP3.93□□□□□ -1.78
KTN1-217ENST00000554831 NFKBIEO00221 500 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 TOP3BO95985 862 aaKnown RBP3.92□□□□□ -1.78
KTN1-217ENST00000554831 HMBSP08397 361 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 FGFR1P11362 822 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 CKMT2P17540 419 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 XPAP23025 273 aaPredicted RBP3.92□□□□□ -1.78
KTN1-217ENST00000554831 IL4RP24394 825 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 SLC7A1P30825 629 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 SLC11A2P49281 568 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 CRYBB1P53674 252 aaPredicted RBP3.92□□□□□ -1.78
KTN1-217ENST00000554831 TBX4P57082 545 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 RAB15P59190 212 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 DPYSQ14117 519 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 PCLAFQ15004 111 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 TRIM16LQ309B1 348 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 TREML2Q5T2D2 321 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 FBXO32Q969P5 355 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 AZIN2Q96A70 460 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 VPS33AQ96AX1 596 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 PRR11Q96HE9 360 aaPredicted RBP3.92□□□□□ -1.78
KTN1-217ENST00000554831 SEMA3CQ99985 751 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 SLC25A51Q9H1U9 297 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 SEMA6AQ9H2E6 1030 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 GOLGA2P5Q9HBQ8 144 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 PIGVQ9NUD9 493 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 RSL24D1Q9UHA3 163 aaKnown RBP3.92□□□□□ -1.78
KTN1-217ENST00000554831 PKP3Q9Y446 797 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 MYBPHLA2RUH7 354 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 NEMP2A6NFY4 417 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 CASTOR2A6NHX0 329 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 AQP12BA6NM10 295 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 BBIP1A8MTZ0 92 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 DLX3O60479 287 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 USP2O75604 605 aaPredicted RBP3.92□□□□□ -1.78
KTN1-217ENST00000554831 RECQL5O94762 991 aaPredicted RBP3.92□□□□□ -1.78
KTN1-217ENST00000554831 MT-CYBP00156 380 aaPredicted RBP3.92□□□□□ -1.78
KTN1-217ENST00000554831 APOA1P02647 267 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 GPIP06744 558 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 PROZP22891 400 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 LMO2P25791 158 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 OR1E1P30953 314 aa3.92□□□□□ -1.78
KTN1-217ENST00000554831 RECQLP46063 649 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms