RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 GK5Q6ZS86 529 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 FTHL17Q9BXU8 183 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 CYP3A43Q9HB55 503 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 ZNF112Q9UJU3 913 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 MTF2Q9Y483 593 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 TIMM13Q9Y5L4 95 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 ZNF182P17025 639 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 KPNA1P52294 538 aaPredicted RBP17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 GNA12Q03113 381 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 GRM3Q14832 879 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 ARL10Q8N8L6 244 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 RNF39Q9H2S5 420 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 POLR1BQ9H9Y6 1135 aa17.1■□□□□ 0.33
PPP4R3A-202ENST00000554390 SAC3D1A6NKF1 404 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 CFAP99D6REC4 459 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 ESRRBO95718 433 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 GRIA4P48058 902 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 MAPK10P53779 464 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 TRAF2Q12933 501 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 PIGZQ86VD9 579 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 DENND6AQ8IWF6 608 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 NPWQ8N729 165 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 SPATA22Q8NHS9 363 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 SNX27Q96L92 541 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 CCDC68Q9H2F9 335 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 NMRAL1Q9HBL8 299 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 PIGVQ9NUD9 493 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 OXSMQ9NWU1 459 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 NCKIPSDQ9NZQ3 722 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 ERGIC3Q9Y282 383 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 TMEM98Q9Y2Y6 226 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 ADM5C9JUS6 153 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 USP2O75604 605 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 NAB1Q13506 487 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 OTOP3Q7RTS5 596 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 SIX6OS1Q8N1H7 587 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 TNIP2Q8NFZ5 429 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 URGCPQ8TCY9 931 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 EDEM1Q92611 657 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 UHRF1Q96T88 793 aaPredicted RBP17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 OSMRQ99650 979 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 VANGL2Q9ULK5 521 aa17.09■□□□□ 0.33
PPP4R3A-202ENST00000554390 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 TCRBV3S1A0A5B6 114 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 PRORSD1PA6NEY8 169 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 NFKBIAP25963 317 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 NME5P56597 212 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 NSUN2Q08J23 767 aaKnown RBP eCLIP17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 GRTP1Q5TC63 336 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 SLC41A1Q8IVJ1 513 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 ACDQ96AP0 544 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 SLC39A3Q9BRY0 314 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 EFHD1Q9BUP0 239 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 TRIM8Q9BZR9 551 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 DRC3Q9H069 523 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 SMARCAD1Q9H4L7 1026 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 PALMDQ9NP74 551 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 SFMBT1Q9UHJ3 866 aa17.08■□□□□ 0.33
PPP4R3A-202ENST00000554390 DLGAP1O14490 977 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 HBP1O60381 514 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 CNOT3O75175 753 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 CLIC3O95833 236 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 LGALS2P05162 132 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 GRM5P41594 1212 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 MAGEA12P43365 314 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 GALNT2Q10471 571 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 ZBTB17Q13105 803 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 SEPT6Q14141 434 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 DALRD3Q5D0E6 543 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 ZC3H7AQ8IWR0 971 aaKnown RBP17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 SLC7A14Q8TBB6 771 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 CPNE1Q99829 537 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 USP3Q9Y6I4 520 aa17.08■□□□□ 0.32
PPP4R3A-202ENST00000554390 ZNF839A8K0R7 811 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 H2AFYO75367 372 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 MYF6P23409 242 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 TTKP33981 857 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ADCYAP1R1P41586 468 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 CXCR3P49682 368 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 GJA9P57773 515 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 MPP1Q00013 466 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 POU6F1Q14863 301 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 RIOX2Q8IUF8 465 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 CBR4Q8N4T8 237 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ANKFN1Q8N957 763 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 TRUB1Q8WWH5 349 aaKnown RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 RBBP8Q99708 897 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ADI1Q9BV57 179 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ACE2Q9BYF1 805 aaPredicted RBP17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 RHOBTB2Q9BYZ6 727 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 UNC93B1Q9H1C4 597 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ASB7Q9H672 318 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 SETD4Q9NVD3 440 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 GIN1Q9NXP7 522 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 MORF4L1Q9UBU8 362 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 C1orf232A0A0U1RR37 186 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ATP6AP2A0A1C7CYW4 349 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 HEATR9A2RTY3 570 aa17.07■□□□□ 0.32
PPP4R3A-202ENST00000554390 ATP6AP2O75787 350 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms