RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 PDCD7Q8N8D1 485 aaKnown RBP12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 OR4C6Q8NH72 309 aa12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 FAM174AQ8TBP5 190 aa12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 LENG8Q96PV6 779 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SNRNP25Q9BV90 132 aaKnown RBP12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 EDEM3Q9BZQ6 932 aa12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PDFQ9HBH1 243 aa12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 GPR27Q9NS67 375 aa12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 UBA2Q9UBT2 640 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 CNOT8Q9UFF9 292 aaKnown RBP12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 RAXQ9Y2V3 346 aa12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 MFHAS1Q9Y4C4 1052 aa12.04□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SPTY2D1-AS1A0A0U1RR47 76 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SYCE3A1L190 88 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PRAMEF11O60813 436 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 NEBLO76041 1014 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 RNF8O76064 485 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PIGNO95427 931 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 MYF5P13349 255 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ACP1P24666 158 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 RABIFP47224 123 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PAPOLAP51003 745 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 NDST2P52849 883 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 TARDBPQ13148 414 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ILKQ13418 452 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PDE1CQ14123 709 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 PPP6R3Q5H9R7 873 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 HES3Q5TGS1 186 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 C19orf48Q6RUI8 117 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 CYP4V2Q6ZWL3 525 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 LUZP1Q86V48 1076 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 VPS36Q86VN1 386 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ZSCAN30Q86W11 494 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ASB12Q8WXK4 309 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ZNF653Q96CK0 615 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ARHGEF26Q96DR7 871 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 IFT43Q96FT9 208 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 WRAP53Q9BUR4 548 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 SLC39A8Q9C0K1 460 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 CBX8Q9HC52 389 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 MYO1AQ9UBC5 1043 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 DKK3Q9UBP4 350 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 DKK4Q9UBT3 224 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 IPO11Q9UI26 975 aaKnown RBP12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 KLF15Q9UIH9 416 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 LRP4O75096 1905 aa12.03□□□□□ -0.48
TRAPPC6B-204ENST00000554018 ARHGEF17Q96PE2 2063 aaPredicted RBP12.02□□□□□ -0.48
TRAPPC6B-204ENST00000554018 UNC13CQ8NB66 2214 aa12.02□□□□□ -0.48
TRAPPC6B-204ENST00000554018 BAHCC1Q9P281 2608 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ARHGAP42A6NI28 874 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 EIF3CLB5ME19 914 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 DAPK3O43293 454 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PRPSAP2O60256 369 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 BUB1BO60566 1050 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 LRCH4O75427 683 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CSF2P04141 144 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ERCC2P18074 760 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 HNF1BP35680 557 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 DAB2P98082 770 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 FANCCQ00597 558 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 HS1BP3Q53T59 392 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 FIGNQ5HY92 759 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 AFMIDQ63HM1 303 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 HGSNATQ68CP4 663 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ARHGAP36Q6ZRI8 547 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 RFX8Q6ZV50 586 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ARHGAP12Q8IWW6 846 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CXorf40AQ8TE69 158 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 FNIP1Q8TF40 1166 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CENPTQ96BT3 561 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 EIF3CQ99613 913 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 NCAPGQ9BPX3 1015 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CPEB1Q9BZB8 566 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 MBNL1Q9NR56 388 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 DONSONQ9NYP3 566 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CWC15Q9P013 229 aaKnown RBP12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.49
TRAPPC6B-204ENST00000554018 ATMQ13315 3056 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 NEMP2A6NFY4 417 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 K7ESM1 405 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 DFFAO00273 331 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SCAMP1O15126 338 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TM7SF2O76062 418 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 CKMT1AP12532 417 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 NME1P15531 152 aaKnown RBP12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 TCF4P15884 667 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 XPAP23025 273 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 IL1R2P27930 398 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 IGFALSP35858 605 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PBX1P40424 430 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 RGRP47804 291 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PFN3P60673 137 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 HNRNPKP61978 463 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 INSM1Q01101 510 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SEMG2Q02383 582 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 EIF2B5Q13144 721 aaKnown RBP12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 KLHL40Q2TBA0 621 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 SRLQ86TD4 932 aa12.01□□□□□ -0.49
TRAPPC6B-204ENST00000554018 PARGQ86W56 976 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms