RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 KLHL5Q96PQ7 755 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 COPS7BQ9H9Q2 264 aaPredicted RBP14.7□□□□□ -0.06
ACTN1-211ENST00000553882 ABCC13Q9NSE7 274 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 NYNRINQ9P2P1 1898 aaKnown RBP14.7□□□□□ -0.06
ACTN1-211ENST00000553882 IPO11Q9UI26 975 aaKnown RBP14.7□□□□□ -0.06
ACTN1-211ENST00000553882 PADI3Q9ULW8 664 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 PSMD13Q9UNM6 376 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 HS3ST4Q9Y661 456 aa14.7□□□□□ -0.06
ACTN1-211ENST00000553882 TSPAN8P19075 237 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 THPOP40225 353 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 PDK3Q15120 406 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 MANEALQ5VSG8 457 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 CD300LGQ6UXG3 332 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 PTAR1Q7Z6K3 402 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-211ENST00000553882 SCD5Q86SK9 330 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 SPATA2LQ8IUW3 424 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-211ENST00000553882 KLHDC8BQ8IXV7 354 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 CPSF7Q8N684 471 aaKnown RBP14.69□□□□□ -0.06
ACTN1-211ENST00000553882 PKMYT1Q99640 499 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 MRPL57Q9BQC6 102 aaKnown RBP14.69□□□□□ -0.06
ACTN1-211ENST00000553882 NT5MQ9NPB1 228 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 OSER1Q9NX31 292 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 A0A1W2PQH9 124 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 KCNU1A8MYU2 1149 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 SLCO1B7G3V0H7 640 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 SDHDO14521 159 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 CASQ2O14958 399 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-211ENST00000553882 FGF10O15520 208 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-211ENST00000553882 HDCP19113 662 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 CYP2C18P33260 490 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 PRKAA2P54646 552 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 TAF1CQ15572 869 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-211ENST00000553882 PPP1R3AQ16821 1122 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 BRMS1LQ5PSV4 323 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 ARTNQ5T4W7 220 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 IL31Q6EBC2 164 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 PGAM4Q8N0Y7 254 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 C2orf69Q8N8R5 385 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 RSPH1Q8WYR4 309 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 PABPC5Q96DU9 382 aaKnown RBP14.69□□□□□ -0.06
ACTN1-211ENST00000553882 DCUN1D1Q96GG9 259 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 SMOC2Q9H3U7 446 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 EFCAB1Q9HAE3 211 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 IGSF5Q9NSI5 407 aa14.69□□□□□ -0.06
ACTN1-211ENST00000553882 ABI2Q9NYB9 513 aaPredicted RBP14.69□□□□□ -0.06
ACTN1-211ENST00000553882 TCAF2A6NFQ2 919 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 J3KR12 359 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 CCDC166P0CW27 439 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 CD86P42081 329 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 TSPY1Q01534 308 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 SULT2A1Q06520 285 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 TLR1Q15399 786 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 OGFRL1Q5TC84 451 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-211ENST00000553882 PIWIL4Q7Z3Z4 852 aaKnown RBP14.68□□□□□ -0.06
ACTN1-211ENST00000553882 ST13P4Q8IZP2 240 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-211ENST00000553882 LZTR1Q8N653 840 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 PCDH20Q8N6Y1 951 aaKnown RBP14.68□□□□□ -0.06
ACTN1-211ENST00000553882 RTL3Q8N8U3 475 aaKnown RBP14.68□□□□□ -0.06
ACTN1-211ENST00000553882 LRGUKQ96M69 825 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 CLIC5Q9NZA1 410 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 ADA2Q9NZK5 511 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 PCDHGB4Q9UN71 923 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 PCDHGB5Q9Y5G0 923 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 AK5Q9Y6K8 562 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 ATP5F1P24539 256 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-211ENST00000553882 GRIA2P42262 883 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 C1QTNF8P60827 252 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 KIAA0930Q6ICG6 404 aaPredicted RBP14.68□□□□□ -0.06
ACTN1-211ENST00000553882 LCA5Q86VQ0 697 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 LILRA2Q8N149 483 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 OR6P1Q8NGX9 317 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 CCDC28BQ9BUN5 200 aa14.68□□□□□ -0.06
ACTN1-211ENST00000553882 NOL6Q9H6R4 1146 aaKnown RBP14.68□□□□□ -0.06
ACTN1-211ENST00000553882 OR51F1A6NGY5 319 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 GPR182O15218 404 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 HAPLN1P10915 354 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-211ENST00000553882 AKR1A1P14550 325 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 ETS2P15036 469 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 ME2P23368 584 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 HOXC13P31276 330 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 HK2P52789 917 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 POU4F1Q01851 419 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 SLC10A7Q0GE19 358 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 FAM83EQ2M2I3 478 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 SLC39A12Q504Y0 691 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 LIN52Q52LA3 116 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 MAP3K21Q5TCX8 1036 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 PIK3R6Q5UE93 754 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 TIGD7Q6NT04 549 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-211ENST00000553882 SETD3Q86TU7 594 aaPredicted RBP14.67□□□□□ -0.06
ACTN1-211ENST00000553882 SPATA24Q86W54 205 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 TRPV1Q8NER1 839 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 CEP70Q8NHQ1 597 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 SH3RF2Q8TEC5 729 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 ANKRD49Q8WVL7 239 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 ADAM2Q99965 735 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 FAM192AQ9GZU8 254 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 TRPC7Q9HCX4 862 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 CCDC167Q9P0B6 97 aa14.67□□□□□ -0.06
ACTN1-211ENST00000553882 C6orf203Q9P0P8 240 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms