RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 NDUFB4O95168 129 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 VNN2O95498 520 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 CD58P19256 250 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 C21orf33P30042 268 aaPredicted RBP3.44□□□□□ -1.86
VRK1-202ENST00000553683 ARL1P40616 181 aaPredicted RBP3.44□□□□□ -1.86
VRK1-202ENST00000553683 RAD23BP54727 409 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 GAS1P54826 345 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 NR1H2P55055 460 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 TUBA1BP68363 451 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 CYP4A11Q02928 519 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 FOXD4Q12950 439 aaPredicted RBP3.44□□□□□ -1.86
VRK1-202ENST00000553683 CTTNQ14247 550 aaKnown RBP3.44□□□□□ -1.86
VRK1-202ENST00000553683 MYBPC2Q14324 1141 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 NFATC4Q14934 902 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 KIF19Q2TAC6 998 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 EDRF1Q3B7T1 1238 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 FBXO43Q4G163 708 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 CCDC129Q6ZRS4 1044 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 CREB3L2Q70SY1 520 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 LRRTM4Q86VH4 590 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 MON1AQ86VX9 555 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 CHD1LQ86WJ1 897 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 TMTC1Q8IUR5 882 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 DCP1BQ8IZD4 617 aaKnown RBP3.44□□□□□ -1.86
VRK1-202ENST00000553683 AADATQ8N5Z0 425 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 MIGA1Q8NAN2 632 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 SMRP1Q8NCR6 262 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 RASSF8Q8NHQ8 419 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 GDPD5Q8WTR4 605 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 TRIB2Q92519 343 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 WASF1Q92558 559 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 USP13Q92995 863 aaPredicted RBP3.44□□□□□ -1.86
VRK1-202ENST00000553683 YME1L1Q96TA2 773 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 PHF7Q9BWX1 381 aaPredicted RBP3.44□□□□□ -1.86
VRK1-202ENST00000553683 PPCSQ9HAB8 311 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 TMEM51Q9NW97 253 aa3.44□□□□□ -1.86
VRK1-202ENST00000553683 A0A1B0GUV1 79 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 DENND3A2RUS2 1198 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 CEP104O60308 925 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 PAPSS2O95340 614 aaPredicted RBP3.43□□□□□ -1.86
VRK1-202ENST00000553683 PPP1R3DO95685 299 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 PLA2G2AP14555 144 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 ZNF12P17014 697 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 SRD5A1P18405 259 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 PEX5P50542 639 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 CCR5P51681 352 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 DHX8Q14562 1220 aaKnown RBP3.43□□□□□ -1.86
VRK1-202ENST00000553683 NAA25Q14CX7 972 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 PPP6R3Q5H9R7 873 aaPredicted RBP3.43□□□□□ -1.86
VRK1-202ENST00000553683 ADGRG6Q86SQ4 1221 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 TBC1D26Q86UD7 250 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 FJX1Q86VR8 437 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 CPOQ8IVL8 374 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 MB21D2Q8IYB1 491 aaPredicted RBP3.43□□□□□ -1.86
VRK1-202ENST00000553683 UBXN10Q96LJ8 280 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 IL25Q9H293 177 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 DDX31Q9H8H2 851 aaKnown RBP3.43□□□□□ -1.86
VRK1-202ENST00000553683 ZNF112Q9UJU3 913 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 CARD8Q9Y2G2 431 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 CNTNAP2Q9UHC6 1331 aa3.43□□□□□ -1.86
VRK1-202ENST00000553683 IGLV5-37A0A075B6J1 123 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 A0A0U1RQF3 1178 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 DYTNA2CJ06 578 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 CPED1A4D0V7 1026 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 EIF3FO00303 357 aaPredicted RBP3.42□□□□□ -1.86
VRK1-202ENST00000553683 IFIT1P09914 478 aaKnown RBP3.42□□□□□ -1.86
VRK1-202ENST00000553683 MT3P25713 68 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 PGM1P36871 562 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 RPL3P39023 403 aaKnown RBP3.42□□□□□ -1.86
VRK1-202ENST00000553683 GABRB2P47870 512 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 KRTAP10-9P60411 292 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 POU5F1BQ06416 359 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 TRAF3Q13114 568 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 CAMK1Q14012 370 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 TAF12Q16514 161 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 ZNF766Q5HY98 468 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 SERTAD4-AS1Q5TG53 156 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 FAM122CQ6P4D5 195 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 SPSB3Q6PJ21 355 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 H1FNTQ75WM6 255 aaPredicted RBP3.42□□□□□ -1.86
VRK1-202ENST00000553683 C16orf82Q7Z2V1 217 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 SMC5Q8IY18 1101 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 RBMXL3Q8N7X1 1067 aaKnown RBP3.42□□□□□ -1.86
VRK1-202ENST00000553683 NEXN-AS1Q8NBZ9 246 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 GPT2Q8TD30 523 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 MAGEC3Q8TD91 643 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 STAMQ92783 540 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 FIZ1Q96SL8 496 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 FUZQ9BT04 418 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 MROH8Q9H579 483 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 SMYD2Q9NRG4 433 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 OR6C3Q9NZP0 311 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 KIAA1456Q9P272 454 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 SLC25A10Q9UBX3 287 aaPredicted RBP3.42□□□□□ -1.86
VRK1-202ENST00000553683 SLC13A4Q9UKG4 626 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 GJD2Q9UKL4 321 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 NFE2L3Q9Y4A8 694 aa3.42□□□□□ -1.86
VRK1-202ENST00000553683 TYW5A2RUC4 315 aaKnown RBP3.41□□□□□ -1.86
VRK1-202ENST00000553683 PABPN1LA6NDY0 278 aaKnown RBP3.41□□□□□ -1.86
VRK1-202ENST00000553683 KLRF2D3W0D1 207 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 836.6 ms