RNA–Protein interactions for RNA: ENST00000550767.5

TUBA1A-207, Transcript of tubulin alpha 1a, humanhuman

TSL 1 (best) BASIC

Gene TUBA1A, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-207ENST00000550767 TUBGCP5Q96RT8 1024 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 HERPUD2Q9BSE4 406 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 HDAC8Q9BY41 377 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 POLR1EQ9GZS1 481 aaKnown RBP12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 ATP13A3Q9H7F0 1226 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 NT5MQ9NPB1 228 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 SCUBE2Q9NQ36 999 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 RBM22Q9NW64 420 aaKnown RBP eCLIP12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 TRMT1Q9NXH9 659 aaKnown RBP12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 AMACRQ9UHK6 382 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 TTLL3Q9Y4R7 772 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 TRPM6Q9BX84 2022 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 DOCK9Q9BZ29 2069 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 PLXNA2O75051 1894 aa12.11□□□□□ -0.47
TUBA1A-207ENST00000550767 GOLGA6L9A6NEM1 432 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 C16orf96A6NNT2 1141 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 KCNK1O00180 336 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 PLRG1O43660 514 aaKnown RBP12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 ADRB3P13945 408 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 CR2P20023 1033 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 DPP6P42658 865 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 IFI35P80217 286 aaPredicted RBP12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 CREB5Q02930 508 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 BCL2L1Q07817 233 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 ITKQ08881 620 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 PRKD1Q15139 912 aaPredicted RBP12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 NOMO1Q15155 1222 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 SYCP2LQ5T4T6 812 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 FBXL19Q6PCT2 694 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 NCEH1Q6PIU2 408 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 ZC3H18Q86VM9 953 aaKnown RBP12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 PAF1Q8N7H5 531 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 C12orf50Q8NA57 414 aaPredicted RBP12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 VOPP1Q96AW1 172 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 ZNF641Q96N77 438 aaPredicted RBP12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 NUDCD1Q96RS6 583 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 CARD9Q9H257 536 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 C6orf106Q9H6K1 298 aaPredicted RBP12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 CNOT1A5YKK6 2376 aaKnown RBP12.1□□□□□ -0.47
TUBA1A-207ENST00000550767 TP53BP1Q12888 1972 aaPredicted RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3DA0A087WVF3 549 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3IA0A087WXS9 549 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3EA0A087X179 549 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3KA0A087X1G2 549 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 DCDC2BA2VCK2 349 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3FA6NER0 549 aaPredicted RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 METTL12A8MUP2 240 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 HACD1B0YJ81 288 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3LB9A6J9 549 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 KCNK3O14649 394 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 MTSS1O43312 755 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 KIF5CO60282 957 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 GDF9O60383 454 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 GJB3O75712 270 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 FSBPO95073 299 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 HLA-DQB2P05538 268 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3HP0C7X1 549 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 MSNP26038 577 aaKnown RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 MPLP40238 635 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 LIMK1P53667 647 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 OTUD4Q01804 1114 aaKnown RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 ZBTB17Q13105 803 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 XRCC4Q13426 336 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 SF3A2Q15428 464 aaKnown RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 AASDHQ4L235 1098 aaPredicted RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 WDR45BQ5MNZ6 344 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 KIAA0895LQ68EN5 471 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3GQ6DHY5 549 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3CQ6IPX1 549 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 RGL4Q8IZJ4 473 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TBC1D3Q8IZP1 549 aaPredicted RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TTC13Q8NBP0 860 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 ACTL9Q8TC94 416 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 SNX19Q92543 992 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 RAB7BQ96AH8 199 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 QKIQ96PU8 341 aaKnown RBP eCLIP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 IL12RB2Q99665 862 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 SEMA3CQ99985 751 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 SUV39H2Q9H5I1 410 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 PREBQ9HCU5 417 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 VPS45Q9NRW7 570 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 SEPT10Q9P0V9 454 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 DKK3Q9UBP4 350 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 PYCARDQ9ULZ3 195 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 ATXN2Q99700 1313 aaKnown RBP12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 LRRK1Q38SD2 2015 aa12.09□□□□□ -0.47
TUBA1A-207ENST00000550767 TSPAN11A1L157 253 aa12.08□□□□□ -0.48
TUBA1A-207ENST00000550767 TTC24A2A3L6 582 aaPredicted RBP12.08□□□□□ -0.48
TUBA1A-207ENST00000550767 BCLAF3A2AJT9 711 aaKnown RBP12.08□□□□□ -0.48
TUBA1A-207ENST00000550767 H7C0C1 242 aa12.08□□□□□ -0.48
TUBA1A-207ENST00000550767 SOCS5O75159 536 aa12.08□□□□□ -0.48
TUBA1A-207ENST00000550767 JCHAINP01591 159 aa12.08□□□□□ -0.48
TUBA1A-207ENST00000550767 XPAP23025 273 aaPredicted RBP12.08□□□□□ -0.48
TUBA1A-207ENST00000550767 ITPKAP23677 461 aa12.08□□□□□ -0.48
TUBA1A-207ENST00000550767 ABL2P42684 1182 aa12.08□□□□□ -0.48
TUBA1A-207ENST00000550767 ATP5OP48047 213 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms