RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 WBP1Q96G27 269 aa23.38■■□□□ 1.33
SMARCD1-209ENST00000550477 TTYH3Q9C0H2 523 aa23.38■■□□□ 1.33
SMARCD1-209ENST00000550477 CATSPERBQ9H7T0 1116 aa23.38■■□□□ 1.33
SMARCD1-209ENST00000550477 CHMP5Q9NZZ3 219 aa23.38■■□□□ 1.33
SMARCD1-209ENST00000550477 ADAM22Q9P0K1 906 aa23.38■■□□□ 1.33
SMARCD1-209ENST00000550477 KLF15Q9UIH9 416 aa23.38■■□□□ 1.33
SMARCD1-209ENST00000550477 NOCTQ9UK39 431 aaKnown RBP23.38■■□□□ 1.33
SMARCD1-209ENST00000550477 SATB2Q9UPW6 733 aa23.38■■□□□ 1.33
SMARCD1-209ENST00000550477 LMO7DNF2Z398 122 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 AREL1O15033 823 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 MUSKO15146 869 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 SPINT1O43278 529 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 EPHB2P29323 1055 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 EIF4A3P38919 411 aaKnown RBP23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 YBEYP58557 167 aaPredicted RBP23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 FMO1Q01740 532 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 GRM3Q14832 879 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 FSTL5Q8N475 847 aaPredicted RBP23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 ATL2Q8NHH9 583 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 SLC30A5Q8TAD4 765 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 SLC20A1Q8WUM9 679 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 VCPIP1Q96JH7 1222 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 NCAPGQ9BPX3 1015 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 BOCQ9BWV1 1114 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 TAB2Q9NYJ8 693 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 DKK3Q9UBP4 350 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 ITM2BQ9Y287 266 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 CHD5Q8TDI0 1954 aa23.37■■□□□ 1.33
SMARCD1-209ENST00000550477 MMP20O60882 483 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 TMCC1O94876 653 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 ALPIP09923 528 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 CTSEP14091 401 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 GPD1P21695 349 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 HTR1BP28222 390 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 MLLT3P42568 568 aaPredicted RBP23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 PEX5P50542 639 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 CFHR1Q03591 330 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 ELOCQ15369 112 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 C6orf132Q5T0Z8 1188 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 CFAP58Q5T655 872 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 ATXN7L2Q5T6C5 722 aaPredicted RBP23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 ARHGAP40Q5TG30 622 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 LEKR1Q6ZMV7 388 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 MACC1Q6ZN28 852 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 SDR16C5Q8N3Y7 309 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 ANKRD20A12PQ8NF67 263 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 WDR36Q8NI36 951 aaKnown RBP23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 JOSD2Q8TAC2 188 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 HCAR2Q8TDS4 363 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 PCMTD1Q96MG8 357 aaPredicted RBP23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 SLC46A1Q96NT5 459 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 EPAS1Q99814 870 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 VPS16Q9H269 839 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 NLRC4Q9NPP4 1024 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 FAM207AQ9NSI2 230 aaPredicted RBP23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 GGT7Q9UJ14 662 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 MFHAS1Q9Y4C4 1052 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 PCDHGA8Q9Y5G5 932 aa23.36■■□□□ 1.33
SMARCD1-209ENST00000550477 FAM72CH0Y354 149 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 AIF1P55008 147 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 HDAC4P56524 1084 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 C1orf61Q13536 156 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 SPIDRQ14159 915 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 FAM72AQ5TYM5 149 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 FAM72DQ6L9T8 149 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 SCYL2Q6P3W7 929 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 LVRNQ6Q4G3 990 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 FAM72BQ86X60 149 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 CCDC185Q8N715 623 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 RTL3Q8N8U3 475 aaKnown RBP23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 ENOX1Q8TC92 643 aaKnown RBP23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 ATXN7L3BQ96GX2 97 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 CPEB1Q9BZB8 566 aaKnown RBP23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 GANQ9H2C0 597 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 CAAP1Q9H8G2 361 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 ASCL3Q9NQ33 180 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 PADI4Q9UM07 663 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 ENTPD2Q9Y5L3 495 aa23.35■■□□□ 1.33
SMARCD1-209ENST00000550477 TMX2-CTNND1H3BSU7 103 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 UNGP13051 313 aaPredicted RBP23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 RFC1P35251 1148 aaPredicted RBP23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 IGFALSP35858 605 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 GSCP56915 257 aaPredicted RBP23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 VAC14Q08AM6 782 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 LRRC14Q15048 493 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 KLHL40Q2TBA0 621 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 PARP15Q460N3 678 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 RAB6CQ53S08 254 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 ERAP2Q6P179 960 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 FOXR1Q6PIV2 292 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 RBFAQ8N0V3 343 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 RAB6CQ9H0N0 254 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 SYNDIG1Q9H7V2 258 aa23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 SEPT11Q9NVA2 429 aaKnown RBP23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 SMG1Q96Q15 3661 aaKnown RBP23.34■■□□□ 1.33
SMARCD1-209ENST00000550477 RP1P56715 2156 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 SIGLEC16A6NMB1 481 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 CREB3O43889 395 aa23.33■■□□□ 1.33
SMARCD1-209ENST00000550477 GCATO75600 419 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms