RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 TRAFD1O14545 582 aaPredicted RBP11.34□□□□□ -0.59
RAB5B-208ENST00000550283 TM4SF5O14894 197 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 AREL1O15033 823 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 DDX3YO15523 660 aaKnown RBP11.34□□□□□ -0.59
RAB5B-208ENST00000550283 PSTPIP1O43586 416 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 SERPINF2P08697 491 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 PYGMP11217 842 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 CD27P26842 260 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 CTNNA1P35221 906 aaKnown RBP11.34□□□□□ -0.59
RAB5B-208ENST00000550283 MAPK8P45983 427 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 NEK3P51956 506 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 GEMIN4P57678 1058 aaKnown RBP11.34□□□□□ -0.59
RAB5B-208ENST00000550283 TRAF2Q12933 501 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 GRIK2Q13002 908 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 ZNF211Q13398 564 aaPredicted RBP11.34□□□□□ -0.59
RAB5B-208ENST00000550283 AASDHQ4L235 1098 aaPredicted RBP11.34□□□□□ -0.59
RAB5B-208ENST00000550283 TMEM259Q4ZIN3 620 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 TMCO4Q5TGY1 634 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 STPG1Q5TH74 334 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 KIAA1328Q86T90 577 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 RFX6Q8HWS3 928 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 KATNAL2Q8IYT4 538 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 ATPAF2Q8N5M1 289 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 TEX26Q8N6G2 289 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 CASKIN2Q8WXE0 1202 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 MAML1Q92585 1016 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 COL26A1Q96A83 441 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 CCDC114Q96M63 670 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 PSKH2Q96QS6 385 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 FAM118BQ9BPY3 351 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 MGME1Q9BQP7 344 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 HEMGNQ9BXL5 484 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 BRD8Q9H0E9 1235 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 NT5MQ9NPB1 228 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 PCDHGC4Q9Y5F7 938 aa11.34□□□□□ -0.59
RAB5B-208ENST00000550283 TCRBV7S2A1N4TA0A589 114 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 TSPAN11A1L157 253 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 LRRC72A6NJI9 287 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 C4orf47A7E2U8 309 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 ZNF487B1APH4 448 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 KHNYNO15037 678 aaKnown RBP11.33□□□□□ -0.6
RAB5B-208ENST00000550283 BCAT2O15382 392 aaPredicted RBP11.33□□□□□ -0.6
RAB5B-208ENST00000550283 SLC31A1O15431 190 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 SLC7A4O43246 635 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 HLA-DQB2P05538 268 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 MMP2P08253 660 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 GM2AP17900 193 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 SCNN1BP51168 640 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 CCR5P51681 352 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 CLDN2P57739 230 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 GSDMDP57764 484 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 DSC2Q02487 901 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 DUOXA1Q1HG43 343 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 KIF19Q2TAC6 998 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 WDR45BQ5MNZ6 344 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 TPRG1LQ5T0D9 272 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 TRIM69Q86WT6 500 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 SPATS2Q86XZ4 545 aaKnown RBP11.33□□□□□ -0.6
RAB5B-208ENST00000550283 C12orf50Q8NA57 414 aaPredicted RBP11.33□□□□□ -0.6
RAB5B-208ENST00000550283 ARRDC2Q8TBH0 407 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 ECHDC3Q96DC8 303 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 ZNF599Q96NL3 588 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 TSGA13Q96PP4 275 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 CINPQ9BW66 212 aaPredicted RBP11.33□□□□□ -0.6
RAB5B-208ENST00000550283 GTPBP2Q9BX10 602 aaKnown RBP11.33□□□□□ -0.6
RAB5B-208ENST00000550283 CPEB1Q9BZB8 566 aaKnown RBP11.33□□□□□ -0.6
RAB5B-208ENST00000550283 PCED1AQ9H1Q7 454 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 SUV39H2Q9H5I1 410 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 DLL3Q9NYJ7 618 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 LCMT1Q9UIC8 334 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 SLC6A14Q9UN76 642 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 FNDC3AQ9Y2H6 1198 aaKnown RBP11.33□□□□□ -0.6
RAB5B-208ENST00000550283 ZKSCAN5Q9Y2L8 839 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 COQ6Q9Y2Z9 468 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 PCDHA3Q9Y5H8 950 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 SNX11Q9Y5W9 270 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 PI4KAP42356 2102 aa11.33□□□□□ -0.6
RAB5B-208ENST00000550283 SPEGQ15772 3267 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 A0A1B0GTW7 788 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 IGLON5A6NGN9 336 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 GOLGA8CPA6NN73 597 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 A8MX80 341 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 ARHGAP33O14559 1287 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 APOL1O14791 398 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 GIPC1O14908 333 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 MATN3O15232 486 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 CST8O60676 142 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 MMP20O60882 483 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 PDHA1P08559 390 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 CTNNA2P26232 953 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 SERPINB6P35237 376 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 MMP13P45452 471 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 CSNK1DP48730 415 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 NAP1L1P55209 391 aaKnown RBP11.32□□□□□ -0.6
RAB5B-208ENST00000550283 LMNB2Q03252 620 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 PPIDQ08752 370 aaKnown RBP11.32□□□□□ -0.6
RAB5B-208ENST00000550283 RALGDSQ12967 914 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 SHBQ15464 509 aa11.32□□□□□ -0.6
RAB5B-208ENST00000550283 KCTD19Q17RG1 926 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms