RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CCDC3Q9BQI4 270 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 BPIFA3Q9BQP9 254 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 PDCL3Q9H2J4 239 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 PIGVQ9NUD9 493 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 COX16Q9P0S2 106 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 SEPT10Q9P0V9 454 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 ANAPC2Q9UJX6 822 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 ZFR2Q9UPR6 939 aaKnown RBP12.41□□□□□ -0.42
DDX54-206ENST00000549271 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
DDX54-206ENST00000549271 HS3ST3A1Q9Y663 406 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 DOCK4Q8N1I0 1966 aa12.41□□□□□ -0.42
DDX54-206ENST00000549271 UNC13CQ8NB66 2214 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 IGLV3-10A0A075B6K4 115 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 I6L893 689 aaPredicted RBP12.4□□□□□ -0.42
DDX54-206ENST00000549271 TEX33O43247 280 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 CNTN5O94779 1100 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 ADCY5O95622 1261 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 LSM8O95777 96 aaKnown RBP12.4□□□□□ -0.42
DDX54-206ENST00000549271 MT-CO1P00395 513 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 CYP1A1P04798 512 aaPredicted RBP12.4□□□□□ -0.42
DDX54-206ENST00000549271 CTSLP07711 333 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 TFE3P19532 575 aaPredicted RBP12.4□□□□□ -0.42
DDX54-206ENST00000549271 CHRNA3P32297 505 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 NUMBP49757 651 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 NOMO3P69849 1222 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 FMO1Q01740 532 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 C2CD6Q53TS8 623 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 KYAT3Q6YP21 454 aaKnown RBP12.4□□□□□ -0.42
DDX54-206ENST00000549271 PTAR1Q7Z6K3 402 aaPredicted RBP12.4□□□□□ -0.42
DDX54-206ENST00000549271 PARGQ86W56 976 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 ZNF677Q86XU0 584 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 DTX1Q86Y01 620 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 DCAF4L2Q8NA75 395 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 ANKRD20A12PQ8NF67 263 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 IL12RB2Q99665 862 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 HDAC8Q9BY41 377 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 TKTL2Q9H0I9 626 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 MUC3BQ9H195 1237 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 WDCPQ9H6R7 721 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 SYNCQ9H7C4 482 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 EPB41L5Q9HCM4 733 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDX54-206ENST00000549271 PLEKHB1Q9UF11 243 aaPredicted RBP12.4□□□□□ -0.42
DDX54-206ENST00000549271 VPS51Q9UID3 782 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 TUBD1Q9UJT1 453 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 STAP1Q9ULZ2 295 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 DAAM1Q9Y4D1 1078 aa12.4□□□□□ -0.42
DDX54-206ENST00000549271 CXorf51AA0A1B0GTR3 108 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 POM121BA6NF01 834 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 TMX2-CTNND1H3BSU7 103 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 PRNPP04156 253 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 RHOCP08134 193 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 HGFP14210 728 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 GGCXP38435 758 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 STAT1P42224 750 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 RPIAP49247 311 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 RNASE9P60153 205 aaKnown RBP12.39□□□□□ -0.43
DDX54-206ENST00000549271 CDR2Q01850 454 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 KCNAB2Q13303 367 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 IQCB1Q15051 598 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 SLC25A52Q3SY17 297 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 TMEM259Q4ZIN3 620 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 ALFQ53S48 1182 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 ARTNQ5T4W7 220 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 NAA35Q5VZE5 725 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 TRNP1Q6NT89 227 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 BORAQ6PGQ7 559 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 ZNF783Q6ZMS7 281 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 BNIPLQ7Z465 357 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 ATP11CQ8NB49 1132 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 NEK11Q8NG66 645 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 PCDHB18PQ96TA0 734 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 SIK2Q9H0K1 926 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 ANLNQ9NQW6 1124 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 TMEM59LQ9UK28 342 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 SDK2Q58EX2 2172 aa12.39□□□□□ -0.43
DDX54-206ENST00000549271 ILVBLA1L0T0 632 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 D6RAR5 112 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
DDX54-206ENST00000549271 SNAP91O60641 907 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 KRT38O76015 456 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 JUNDP17535 347 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 CCKBRP32239 447 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 POLE2P56282 527 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 SLC20A2Q08357 652 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 SEL1L3Q68CR1 1132 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 LRRC31Q6UY01 552 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 ERN2Q76MJ5 926 aaKnown RBP12.38□□□□□ -0.43
DDX54-206ENST00000549271 ARCQ7LC44 396 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 ZSCAN30Q86W11 494 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 ZFAND4Q86XD8 727 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 LMX1AQ8TE12 382 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 GLMNQ92990 594 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 PCMTD1Q96MG8 357 aaPredicted RBP12.38□□□□□ -0.43
DDX54-206ENST00000549271 HAPLN3Q96S86 360 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 SLC12A9Q9BXP2 914 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 CEP44Q9C0F1 390 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 STRADBQ9C0K7 418 aa12.38□□□□□ -0.43
DDX54-206ENST00000549271 NAT10Q9H0A0 1025 aaKnown RBP12.38□□□□□ -0.43
DDX54-206ENST00000549271 RTN4Q9NQC3 1192 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms