RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SETQ01105 290 aaPredicted RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 SRSF1Q07955 248 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 SLC45A4Q5BKX6 768 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 ENTPD8Q5MY95 495 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 SERTAD4-AS1Q5TG53 156 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 SPATA1Q5VX52 437 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 TXNDC8Q6A555 127 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 MOB3CQ70IA8 216 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 B4GALNT4Q76KP1 1039 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 FAM160B2Q86V87 743 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 SLC25A41Q8N5S1 370 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 KDM1BQ8NB78 822 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 DNAAF1Q8NEP3 725 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 ETNPPLQ8TBG4 499 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 EME1Q96AY2 570 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 KIF1BPQ96EK5 621 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 PERPQ96FX8 193 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 KLHL15Q96M94 604 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 TUBB6Q9BUF5 446 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 ITPAQ9BY32 194 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 PRSS22Q9GZN4 317 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 MUC13Q9H3R2 512 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 PNRC2Q9NPJ4 139 aaKnown RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 THSD1Q9NS62 852 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 RRP7BPQ9NSQ0 103 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 NCKIPSDQ9NZQ3 722 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 FBXO2Q9UK22 296 aaPredicted RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 PSAT1Q9Y617 370 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 JCADQ9P266 1359 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 CAMSAP2Q08AD1 1489 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 VWDEQ8N2E2 1590 aa4.34□□□□□ -1.71
PTCH1-216ENST00000548379 ZNF142P52746 1687 aaPredicted RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 CLTCQ00610 1675 aaKnown RBP4.34□□□□□ -1.71
PTCH1-216ENST00000548379 SETD1BQ9UPS6 1966 aaKnown RBP4.33□□□□□ -1.72
PTCH1-216ENST00000548379 ERVK-7P63135 1459 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 NCOA2Q15596 1464 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 TMEM2Q9UHN6 1383 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 ZNF814B7Z6K7 855 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 ZBED4O75132 1171 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 ATG13O75143 517 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 SEC14L2O76054 403 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 IL1AP01583 271 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 CELA2AP08217 269 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 HOXD9P28356 352 aaPredicted RBP4.33□□□□□ -1.72
PTCH1-216ENST00000548379 MAPK4P31152 587 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 FMO4P31512 558 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 CIITAP33076 1130 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 TTKP33981 857 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 RYKP34925 604 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 DPP6P42658 865 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 RPS3AP61247 264 aaKnown RBP4.33□□□□□ -1.72
PTCH1-216ENST00000548379 SSBP2P81877 361 aaPredicted RBP4.33□□□□□ -1.72
PTCH1-216ENST00000548379 ID2Q02363 134 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 EIF4A2Q14240 407 aaKnown RBP4.33□□□□□ -1.72
PTCH1-216ENST00000548379 SMTNL2Q2TAL5 461 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 SUPT20HL1Q3ZLR7 823 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 ALG10Q5BKT4 473 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 ALG10BQ5I7T1 473 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 SLC18B1Q6NT16 456 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 FAM83HQ6ZRV2 1179 aaPredicted RBP4.33□□□□□ -1.72
PTCH1-216ENST00000548379 TMC8Q8IU68 726 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 FAM185AQ8N0U4 392 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 COQ8BQ96D53 544 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 BARD1Q99728 777 aaKnown RBP4.33□□□□□ -1.72
PTCH1-216ENST00000548379 PIP5K1AQ99755 562 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 HEMGNQ9BXL5 484 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 PCDHB16Q9NRJ7 776 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 SNTG1Q9NSN8 517 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 PCDHGB5Q9Y5G0 923 aa4.33□□□□□ -1.72
PTCH1-216ENST00000548379 SUPT6HQ7KZ85 1726 aaKnown RBP4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CDC42BPBQ9Y5S2 1711 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 NEURL4Q96JN8 1562 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 LRRC9Q6ZRR7 1453 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 MYOM3Q5VTT5 1437 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 KIF15Q9NS87 1388 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 ANKRD18BA2A2Z9 1011 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 C17orf102A2RUQ5 167 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 KIF1CO43896 1103 aaKnown RBP4.32□□□□□ -1.72
PTCH1-216ENST00000548379 DOK2O60496 412 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 LDHCP07864 332 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 ACADMP11310 421 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 PTPN2P17706 415 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CTPS1P17812 591 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 TM4SF1P30408 202 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 INHBEP58166 350 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 PRKG2Q13237 762 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 DCTN2Q13561 401 aaKnown RBP4.32□□□□□ -1.72
PTCH1-216ENST00000548379 IDI1Q13907 227 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 RNPS1Q15287 305 aaKnown RBP4.32□□□□□ -1.72
PTCH1-216ENST00000548379 MEA1Q16626 185 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 EDRF1Q3B7T1 1238 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 FAM205BPQ63HN1 556 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 ATG9BQ674R7 924 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CDC73Q6P1J9 531 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 FASTKD5Q7L8L6 764 aaKnown RBP4.32□□□□□ -1.72
PTCH1-216ENST00000548379 SLC46A3Q7Z3Q1 461 aa4.32□□□□□ -1.72
PTCH1-216ENST00000548379 YTHDF3Q7Z739 585 aaKnown RBP4.32□□□□□ -1.72
PTCH1-216ENST00000548379 CPLX4Q7Z7G2 160 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms