RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 TRIM4Q9C037 500 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 NCKIPSDQ9NZQ3 722 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 RABGEF1Q9UJ41 708 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 TMEM59LQ9UK28 342 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 HPCAL4Q9UM19 191 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 FHOD1Q9Y613 1164 aa12.12□□□□□ -0.47
TRAFD1-205ENST00000548277 CCDC187A0A096LP49 1063 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 GTPBP10A4D1E9 387 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 CDRT15L2A8MXV6 281 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 INSIG1O15503 277 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 EFSO43281 561 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 POP4O95707 220 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 SLC5A2P31639 672 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 CCL7P80098 99 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 C1QBPQ07021 282 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 NFATC3Q12968 1075 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 MAN2A1Q16706 1144 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 NOP9Q86U38 636 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 SDR16C5Q8N3Y7 309 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 FBXO39Q8N4B4 442 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 Q8N9G6 341 aaPredicted RBP12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 MLKLQ8NB16 471 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 RXFP2Q8WXD0 754 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 RAB7BQ96AH8 199 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 CCDC74AQ96AQ1 378 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 MED8Q96G25 268 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 PPARGC1AQ9UBK2 798 aaKnown RBP12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 PCDHGA8Q9Y5G5 932 aa12.11□□□□□ -0.47
TRAFD1-205ENST00000548277 ATMQ13315 3056 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 LMO7DNF2Z398 122 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 TCEA3O75764 348 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 RPLP0P05388 317 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 TIMP2P16035 220 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 XPAP23025 273 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 CDH5P33151 784 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 ADRA1BP35368 520 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 PDX1P52945 283 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 RHOAP61586 193 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 NFKB2Q00653 900 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 KCNC4Q03721 635 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 IRF4Q15306 451 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 ARL13BQ3SXY8 428 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 CCDC14Q49A88 953 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 VWA3BQ502W6 1294 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 DPY19L2P1Q6NXN4 242 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 USP53Q70EK8 1073 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 RAB11FIP2Q7L804 512 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 PYROXD2Q8N2H3 581 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 EXD3Q8N9H8 876 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 KYQ8NBH2 561 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 TP53I13Q8NBR0 393 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 DENND6BQ8NEG7 585 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 PCDH19Q8TAB3 1148 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 JOSD2Q8TAC2 188 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 SLC30A5Q8TAD4 765 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 GPT2Q8TD30 523 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 ASB12Q8WXK4 309 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 NAT6Q93015 286 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 ISG20Q96AZ6 181 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 EXOC2Q96KP1 924 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 GFM1Q96RP9 751 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 CCNL2Q96S94 520 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 CPEB1Q9BZB8 566 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 KLC2Q9H0B6 622 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 NDST4Q9H3R1 872 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 CLSTN2Q9H4D0 955 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 CLMPQ9H6B4 373 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 ATXN7L1Q9ULK2 861 aaPredicted RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 GPR34Q9UPC5 381 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 ZNF462Q96JM2 2506 aa12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 SETXQ7Z333 2677 aaKnown RBP12.1□□□□□ -0.47
TRAFD1-205ENST00000548277 ZFC3H1O60293 1989 aaKnown RBP12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 PLD2O14939 933 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 AREL1O15033 823 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 KDELR3O43731 214 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 RAMP2O60895 175 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 TMCC1O94876 653 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 LRIG2O94898 1065 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 PIGNO95427 931 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 GSRP00390 522 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 PRKCGP05129 697 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 PLEKP08567 350 aaPredicted RBP12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 RHOQP17081 205 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 UGT1A5P35504 534 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 SCNN1AP37088 669 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 ETFBP38117 255 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 YPEL5P62699 121 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 NOMO3P69849 1222 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 SKOR1P84550 965 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 RAD51Q06609 339 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 MIIPQ5JXC2 388 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 ACBD5Q5T8D3 534 aaPredicted RBP12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 KLHDC7AQ5VTJ3 777 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 IGF2-ASQ6U949 168 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 MACC1Q6ZN28 852 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 BNIPLQ7Z465 357 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 NLRP14Q86W24 1093 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 PLPP6Q8IY26 295 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 CCDC185Q8N715 623 aa12.09□□□□□ -0.47
TRAFD1-205ENST00000548277 MSANTD4Q8NCY6 345 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms