RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 LRRC73Q5JTD7 316 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 HES3Q5TGS1 186 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 SFMBT2Q5VUG0 894 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 DESI1Q6ICB0 168 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 KIAA1161Q6NSJ0 714 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 GDPD4Q6W3E5 623 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 GCNT7Q6ZNI0 430 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 TRIM46Q7Z4K8 759 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 ABI3BPQ7Z7G0 1075 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 SLC22A18ASQ8N1D0 253 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 RTL3Q8N8U3 475 aaKnown RBP6.8□□□□□ -1.32
SCAF11-211ENST00000547950 NTAN1Q96AB6 310 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 HMCESQ96FZ2 354 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 CELF6Q96J87 481 aaKnown RBP6.8□□□□□ -1.32
SCAF11-211ENST00000547950 LRIG1Q96JA1 1093 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 C1QTNF2Q9BXJ5 285 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 TTYH3Q9C0H2 523 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 CATSPERBQ9H7T0 1116 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 PARVAQ9NVD7 372 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 TMEM63CQ9P1W3 806 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 PCSK1NQ9UHG2 260 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 GGT7Q9UJ14 662 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 FZD10Q9ULW2 581 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 NEU3Q9UQ49 428 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 GPSM3Q9Y4H4 160 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 CHD6Q8TD26 2715 aa6.8□□□□□ -1.32
SCAF11-211ENST00000547950 ZFHX4Q86UP3 3567 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 CKAP5Q14008 2032 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 NUMA1Q14980 2115 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 CXorf51AA0A1B0GTR3 108 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 NEMP2A6NFY4 417 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 ZSCAN5CA6NGD5 496 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 LRRC53A6NM62 1247 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 CFAP99D6REC4 459 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 J3KR12 359 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 INSIG1O15503 277 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 DAPK3O43293 454 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 AP1G1O43747 822 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 PIAS2O75928 621 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 NEBLO76041 1014 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 IGSF6O95976 241 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 FTLP02792 175 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 ALPPL2P10696 532 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 SKILP12757 684 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 TIMP2P16035 220 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 XPAP23025 273 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 PSMA2P25787 234 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 RABIFP47224 123 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 ZNF165P49910 485 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 AIF1P55008 147 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 TPI1P60174 286 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 E2F1Q01094 437 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 ILKQ13418 452 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 SERINC3Q13530 473 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 PDE1CQ14123 709 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 ASIC2Q16515 512 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 CA9Q16790 459 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 COL28A1Q2UY09 1125 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 PARP15Q460N3 678 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 CAVIN1Q6NZI2 390 aaKnown RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 LYPD8Q6UX82 237 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 KDM7AQ6ZMT4 941 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 VPS36Q86VN1 386 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 DCP2Q8IU60 420 aaKnown RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 UMODL1-AS1Q8N2C9 162 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 OR4C6Q8NH72 309 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 FAM174AQ8TBP5 190 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 CXorf40AQ8TE69 158 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 RAB7BQ96AH8 199 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 ARHGEF26Q96DR7 871 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 VCPIP1Q96JH7 1222 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 EXOC2Q96KP1 924 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 GDAP1L1Q96MZ0 367 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 NAP1L5Q96NT1 182 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 LENG8Q96PV6 779 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 KLF6Q99612 283 aaPredicted RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 NCAPGQ9BPX3 1015 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 WRAP53Q9BUR4 548 aaKnown RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 OSBPL1AQ9BXW6 950 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 ABCG4Q9H172 646 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 DHX35Q9H5Z1 703 aaKnown RBP6.79□□□□□ -1.32
SCAF11-211ENST00000547950 HAUS4Q9H6D7 363 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 KLF15Q9UIH9 416 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 CLCA2Q9UQC9 943 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 PCNX2A6NKB5 2137 aa6.79□□□□□ -1.32
SCAF11-211ENST00000547950 SPTY2D1-AS1A0A0U1RR47 76 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 CPED1A4D0V7 1026 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 TMEM191CA6NGB0 347 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 WASH4PA8MWX3 477 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 K7ESM1 405 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 EEF2KO00418 725 aaKnown RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 AREL1O15033 823 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 SCAMP1O15126 338 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 FGF10O15520 208 aaPredicted RBP6.78□□□□□ -1.32
SCAF11-211ENST00000547950 SPINT1O43278 529 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 PRPSAP2O60256 369 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 TM7SF2O76062 418 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 RNF8O76064 485 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 MT-CO3P00414 261 aa6.78□□□□□ -1.32
SCAF11-211ENST00000547950 SERPINC1P01008 464 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms