RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 RBL1P28749 1068 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 SERPINA4P29622 427 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 NEK3P51956 506 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 TAS2R38P59533 333 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 CCDC15Q0P6D6 951 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 LPAL2Q16609 132 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 ADAT2Q7Z6V5 191 aaKnown RBP20.69■□□□□ 0.9
HMGA2-211ENST00000545998 CDKL3Q8IVW4 592 aaPredicted RBP20.69■□□□□ 0.9
HMGA2-211ENST00000545998 CADM4Q8NFZ8 388 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 OR14C36Q8NHC7 312 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 ARRDC2Q8TBH0 407 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 HCAR2Q8TDS4 363 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 PBKQ96KB5 322 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 AGAP3Q96P47 875 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 WDR24Q96S15 920 aa20.69■□□□□ 0.9
HMGA2-211ENST00000545998 TSPAN11A1L157 253 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 BCLAF3A2AJT9 711 aaKnown RBP20.68■□□□□ 0.9
HMGA2-211ENST00000545998 C10orf142B7Z368 130 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 TRAFD1O14545 582 aaPredicted RBP20.68■□□□□ 0.9
HMGA2-211ENST00000545998 FGGP02679 453 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 DSC2Q02487 901 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 NIPAL4Q0D2K0 466 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 IHHQ14623 411 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 HS1BP3Q53T59 392 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 FBXL19Q6PCT2 694 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 DEFB119Q8N690 84 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 OR2T34Q8NGX1 318 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 SLC35B2Q8TB61 432 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 ECHDC3Q96DC8 303 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 TEKT5Q96M29 485 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 PCED1AQ9H1Q7 454 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 KDM4CQ9H3R0 1056 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 C6orf106Q9H6K1 298 aaPredicted RBP20.68■□□□□ 0.9
HMGA2-211ENST00000545998 RAB23Q9ULC3 237 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 SNX12Q9UMY4 172 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 PCDHGC4Q9Y5F7 938 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 DOCK9Q9BZ29 2069 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 ZNF292O60281 2723 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 EP300Q09472 2414 aaPredicted RBP20.68■□□□□ 0.9
HMGA2-211ENST00000545998 HTRA2O43464 458 aaPredicted RBP20.68■□□□□ 0.9
HMGA2-211ENST00000545998 SOCS5O75159 536 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 PTGER3P43115 390 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 SIX1Q15475 284 aaPredicted RBP20.68■□□□□ 0.9
HMGA2-211ENST00000545998 DARS2Q6PI48 645 aaKnown RBP20.68■□□□□ 0.9
HMGA2-211ENST00000545998 BRAT1Q6PJG6 821 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 SLC41A1Q8IVJ1 513 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 RASGEF1CQ8N431 466 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 NKD2Q969F2 451 aaPredicted RBP20.68■□□□□ 0.9
HMGA2-211ENST00000545998 OSBPL9Q96SU4 736 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 VAT1Q99536 393 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 FRMD8P1Q9BZ68 369 aaPredicted RBP20.68■□□□□ 0.9
HMGA2-211ENST00000545998 USP29Q9HBJ7 922 aa20.68■□□□□ 0.9
HMGA2-211ENST00000545998 TRPM6Q9BX84 2022 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 LRRC72A6NJI9 287 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 LMNAP02545 664 aaKnown RBP20.67■□□□□ 0.9
HMGA2-211ENST00000545998 MMP2P08253 660 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 TIMP2P16035 220 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 TRAF2Q12933 501 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 LAIR1Q6GTX8 287 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 ZSWIM9Q86XI8 627 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.67■□□□□ 0.9
HMGA2-211ENST00000545998 ATG4AQ8WYN0 398 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 SPOCK2Q92563 424 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 FOXJ1Q92949 421 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 RAB7BQ96AH8 199 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 LOXL4Q96JB6 756 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 DNPEPQ9ULA0 475 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 FADS3Q9Y5Q0 445 aa20.67■□□□□ 0.9
HMGA2-211ENST00000545998 FAM47DPA6NHR8 397 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 AP1G1O43747 822 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 CD68P34810 354 aaPredicted RBP20.66■□□□□ 0.9
HMGA2-211ENST00000545998 ABL2P42684 1182 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 TTC7BQ86TV6 843 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 ZNF567Q8N184 647 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 MAIP1Q8WWC4 291 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 IMP4Q96G21 291 aaKnown RBP20.66■□□□□ 0.9
HMGA2-211ENST00000545998 HSPA12BQ96MM6 686 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 FERMT1Q9BQL6 677 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 SLC25A51Q9H1U9 297 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 GLOD4Q9HC38 313 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 PREBQ9HCU5 417 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.66■□□□□ 0.9
HMGA2-211ENST00000545998 TTC7AQ9ULT0 858 aaPredicted RBP20.66■□□□□ 0.9
HMGA2-211ENST00000545998 RAI2Q9Y5P3 530 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 DNAH14Q0VDD8 3507 aa20.66■□□□□ 0.9
HMGA2-211ENST00000545998 RALGAPA1Q6GYQ0 2036 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 PI4KAP42356 2102 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TBC1D3DA0A087WVF3 549 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TBC1D3IA0A087WXS9 549 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TBC1D3EA0A087X179 549 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TBC1D3KA0A087X1G2 549 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TBC1D3FA6NER0 549 aaPredicted RBP20.65■□□□□ 0.9
HMGA2-211ENST00000545998 METTL12A8MUP2 240 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 TBC1D3LB9A6J9 549 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 CES2O00748 559 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 KCNN4O15554 427 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 SPINT1O43278 529 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 LIASO43766 372 aa20.65■□□□□ 0.9
HMGA2-211ENST00000545998 ZNF189O75820 626 aaPredicted RBP20.65■□□□□ 0.9
HMGA2-211ENST00000545998 SERPINF2P08697 491 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms