RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 P2RY11Q96G91 374 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 TPD52L3Q96J77 140 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 TCF12Q99081 682 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 KLHL25Q9H0H3 589 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 FBXO5Q9UKT4 447 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 CORO1CQ9ULV4 474 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-209ENST00000545689 IGLV3-22A0A075B6J6 115 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 KRT36O76013 467 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 CCNE2O96020 404 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 CLTBP09497 229 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 ITGA2P17301 1181 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 FLT3P36888 993 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 TSPAN14Q8NG11 270 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 WDR60Q8WVS4 1066 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 BSNDQ8WZ55 320 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 NELL1Q92832 810 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 HOPXQ9BPY8 73 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-209ENST00000545689 SEMA6AQ9H2E6 1030 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 DMAC2Q9NW81 257 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 MAFBQ9Y5Q3 323 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-209ENST00000545689 AZIN1O14977 448 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 AHCYL1O43865 530 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 HSMCR30P0CW71 290 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 MYL12AP19105 171 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 UBAP2LQ14157 1087 aaKnown RBP12.62□□□□□ -0.39
COL4A6-209ENST00000545689 BTG3Q14201 252 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-209ENST00000545689 NEDD8Q15843 81 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 PPM1LQ5SGD2 360 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 GPR142Q7Z601 462 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 DPP10Q8N608 796 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 SELENOMQ8WWX9 145 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 CD101Q93033 1021 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 LGMNQ99538 433 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 MRPL45Q9BRJ2 306 aaKnown RBP12.62□□□□□ -0.39
COL4A6-209ENST00000545689 C3orf18Q9UK00 162 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 ZMYND8Q9ULU4 1186 aaPredicted RBP12.62□□□□□ -0.39
COL4A6-209ENST00000545689 ZNF510Q9Y2H8 683 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 B4GALT5O43286 388 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 PCSK2P16519 638 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 ADSSP30520 456 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 OR8H2Q8N162 312 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 MRPL17Q9NRX2 175 aaKnown RBP12.62□□□□□ -0.39
COL4A6-209ENST00000545689 XPR1Q9UBH6 696 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 SIGLEC1Q9BZZ2 1709 aa12.62□□□□□ -0.39
COL4A6-209ENST00000545689 A0A1W2PPM1 405 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 MYL12BO14950 172 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 FTH1P02794 183 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 LPOP22079 712 aaPredicted RBP12.61□□□□□ -0.39
COL4A6-209ENST00000545689 KLRC2P26717 231 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 CENPAP49450 140 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 ARMC4Q5T2S8 1044 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 ZDHHC20Q5W0Z9 365 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 ZNF621Q6ZSS3 439 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 ARHGAP22Q7Z5H3 698 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 PDGFDQ9GZP0 370 aaPredicted RBP12.61□□□□□ -0.39
COL4A6-209ENST00000545689 KLQ9UEF7 1012 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 FAM50BQ9Y247 325 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 HBS1LQ9Y450 684 aaKnown RBP12.61□□□□□ -0.39
COL4A6-209ENST00000545689 IRF6O14896 467 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 SKP1P63208 163 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 SGCGQ13326 291 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 CYP1B1Q16678 543 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 SETMARQ53H47 684 aaPredicted RBP12.61□□□□□ -0.39
COL4A6-209ENST00000545689 METTL21CQ5VZV1 264 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 MTMR14Q8NCE2 650 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 CENPXA8MT69 81 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 CAPN15O75808 1086 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 ARF4P18085 180 aaPredicted RBP12.61□□□□□ -0.39
COL4A6-209ENST00000545689 GRIA3P42263 894 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 ALDH9A1P49189 494 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 EVX2Q03828 476 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 CDK18Q07002 472 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 C11orf74Q86VG3 221 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 CSPG4P5Q96PW8 444 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 ASB8Q9H765 288 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 GLOD4Q9HC38 313 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 GCATO75600 419 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 PPIBP23284 216 aaKnown RBP12.61□□□□□ -0.39
COL4A6-209ENST00000545689 NTSP30990 170 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 CDC42P60953 191 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 CDC73Q6P1J9 531 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 MON1AQ86VX9 555 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 PAIP1Q9H074 479 aaKnown RBP12.61□□□□□ -0.39
COL4A6-209ENST00000545689 ABCB1P08183 1280 aaPredicted RBP12.61□□□□□ -0.39
COL4A6-209ENST00000545689 HPGDP15428 266 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 PTGIRP43119 386 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 SMIM11AP58511 58 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 BEX3Q00994 111 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 BNIP1Q12981 228 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 C16orf59Q7L2K0 433 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 OR4L1Q8NH43 312 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 HEXDCQ8WVB3 486 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 BBS4Q96RK4 519 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 SEMA3CQ99985 751 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 NOCTQ9UK39 431 aaKnown RBP12.61□□□□□ -0.39
COL4A6-209ENST00000545689 SESN1Q9Y6P5 492 aa12.61□□□□□ -0.39
COL4A6-209ENST00000545689 C5orf60A6NFR6 353 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 MAPK9P45984 424 aa12.6□□□□□ -0.39
COL4A6-209ENST00000545689 IRF8Q02556 426 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms