RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 FIBCD1Q8N539 461 aa8.83□□□□□ -1
TDP1-204ENST00000545686 PCDH20Q8N6Y1 951 aaKnown RBP8.83□□□□□ -1
TDP1-204ENST00000545686 PPHLN1Q8NEY8 458 aaKnown RBP8.83□□□□□ -1
TDP1-204ENST00000545686 ZSCAN18Q8TBC5 510 aaPredicted RBP8.83□□□□□ -1
TDP1-204ENST00000545686 FNDC8Q8TC99 324 aa8.83□□□□□ -1
TDP1-204ENST00000545686 NDRG1Q92597 394 aaKnown RBP8.83□□□□□ -1
TDP1-204ENST00000545686 ZUFSPQ96AP4 578 aa8.83□□□□□ -1
TDP1-204ENST00000545686 NXNL1Q96CM4 212 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TBL1YQ9BQ87 522 aa8.83□□□□□ -1
TDP1-204ENST00000545686 APOL2Q9BQE5 337 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TRMOQ9BU70 441 aa8.83□□□□□ -1
TDP1-204ENST00000545686 RHOBTB2Q9BYZ6 727 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TRIM15Q9C019 465 aa8.83□□□□□ -1
TDP1-204ENST00000545686 MROH8Q9H579 483 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TRPC7Q9HCX4 862 aa8.83□□□□□ -1
TDP1-204ENST00000545686 PDGFCQ9NRA1 345 aa8.83□□□□□ -1
TDP1-204ENST00000545686 COX16Q9P0S2 106 aa8.83□□□□□ -1
TDP1-204ENST00000545686 CROTQ9UKG9 612 aa8.83□□□□□ -1
TDP1-204ENST00000545686 SNX13Q9Y5W8 968 aa8.83□□□□□ -1
TDP1-204ENST00000545686 GBF1Q92538 1859 aa8.83□□□□□ -1
TDP1-204ENST00000545686 ANKRD36A6QL64 1941 aa8.83□□□□□ -1
TDP1-204ENST00000545686 A0A087WXM4 84 aa8.83□□□□□ -1
TDP1-204ENST00000545686 PRORSD1PA6NEY8 169 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TRIM64A6NGJ6 449 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TMEM233B4DJY2 109 aa8.83□□□□□ -1
TDP1-204ENST00000545686 MRASO14807 208 aa8.83□□□□□ -1
TDP1-204ENST00000545686 SPTLC1O15269 473 aa8.83□□□□□ -1
TDP1-204ENST00000545686 HUS1O60921 280 aa8.83□□□□□ -1
TDP1-204ENST00000545686 ANXA9O76027 345 aa8.83□□□□□ -1
TDP1-204ENST00000545686 RECQL4O94761 1208 aa8.83□□□□□ -1
TDP1-204ENST00000545686 F9P00740 461 aa8.83□□□□□ -1
TDP1-204ENST00000545686 KCNE1P15382 129 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TPH1P17752 444 aa8.83□□□□□ -1
TDP1-204ENST00000545686 PAMP19021 973 aa8.83□□□□□ -1
TDP1-204ENST00000545686 ARCN1P48444 511 aaKnown RBP8.83□□□□□ -1
TDP1-204ENST00000545686 CD151P48509 253 aa8.83□□□□□ -1
TDP1-204ENST00000545686 ESRRGP62508 458 aa8.83□□□□□ -1
TDP1-204ENST00000545686 CCNA1P78396 465 aa8.83□□□□□ -1
TDP1-204ENST00000545686 PFKPQ01813 784 aa8.83□□□□□ -1
TDP1-204ENST00000545686 SPATS1Q496A3 300 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TECRLQ5HYJ1 363 aa8.83□□□□□ -1
TDP1-204ENST00000545686 HMBOX1Q6NT76 420 aa8.83□□□□□ -1
TDP1-204ENST00000545686 PRMT9Q6P2P2 845 aa8.83□□□□□ -1
TDP1-204ENST00000545686 CLEC20AQ6ZU45 233 aa8.83□□□□□ -1
TDP1-204ENST00000545686 ERMP1Q7Z2K6 904 aa8.83□□□□□ -1
TDP1-204ENST00000545686 CEP97Q8IW35 865 aa8.83□□□□□ -1
TDP1-204ENST00000545686 BBS5Q8N3I7 341 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TERB1Q8NA31 727 aa8.83□□□□□ -1
TDP1-204ENST00000545686 C2CD4AQ8NCU7 369 aaPredicted RBP8.83□□□□□ -1
TDP1-204ENST00000545686 OR2T34Q8NGX1 318 aa8.83□□□□□ -1
TDP1-204ENST00000545686 OR2T3Q8NH03 318 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TFAP2CQ92754 450 aa8.83□□□□□ -1
TDP1-204ENST00000545686 TCF12Q99081 682 aa8.83□□□□□ -1
TDP1-204ENST00000545686 OSBPL2Q9H1P3 480 aa8.83□□□□□ -1
TDP1-204ENST00000545686 SEMA6AQ9H2E6 1030 aa8.83□□□□□ -1
TDP1-204ENST00000545686 CAAP1Q9H8G2 361 aa8.83□□□□□ -1
TDP1-204ENST00000545686 PLGRKTQ9HBL7 147 aa8.83□□□□□ -1
TDP1-204ENST00000545686 ACSS2Q9NR19 701 aa8.83□□□□□ -1
TDP1-204ENST00000545686 DUS2Q9NX74 493 aaKnown RBP8.83□□□□□ -1
TDP1-204ENST00000545686 CDH7Q9ULB5 785 aa8.83□□□□□ -1
TDP1-204ENST00000545686 A0A1B0GTW7 788 aa8.82□□□□□ -1
TDP1-204ENST00000545686 GOLGA8TH3BQL2 631 aa8.82□□□□□ -1
TDP1-204ENST00000545686 NRP2O60462 931 aa8.82□□□□□ -1
TDP1-204ENST00000545686 FYNP06241 537 aa8.82□□□□□ -1
TDP1-204ENST00000545686 MYL3P08590 195 aa8.82□□□□□ -1
TDP1-204ENST00000545686 TTKP33981 857 aa8.82□□□□□ -1
TDP1-204ENST00000545686 SLC12A2P55011 1212 aa8.82□□□□□ -1
TDP1-204ENST00000545686 DAOAP59103 153 aa8.82□□□□□ -1
TDP1-204ENST00000545686 MPP1Q00013 466 aa8.82□□□□□ -1
TDP1-204ENST00000545686 GRIK4Q16099 956 aa8.82□□□□□ -1
TDP1-204ENST00000545686 FAM83EQ2M2I3 478 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ZBED5Q49AG3 693 aa8.82□□□□□ -1
TDP1-204ENST00000545686 AGKQ53H12 422 aa8.82□□□□□ -1
TDP1-204ENST00000545686 XKR4Q5GH76 650 aa8.82□□□□□ -1
TDP1-204ENST00000545686 KIAA0930Q6ICG6 404 aaPredicted RBP8.82□□□□□ -1
TDP1-204ENST00000545686 RWDD4Q6NW29 188 aaKnown RBP8.82□□□□□ -1
TDP1-204ENST00000545686 CNSTQ6PJW8 725 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ZBTB49Q6ZSB9 765 aa8.82□□□□□ -1
TDP1-204ENST00000545686 GPR141Q7Z602 305 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ZNF554Q86TJ5 538 aa8.82□□□□□ -1
TDP1-204ENST00000545686 DHFR2Q86XF0 187 aa8.82□□□□□ -1
TDP1-204ENST00000545686 SLC22A9Q8IVM8 553 aa8.82□□□□□ -1
TDP1-204ENST00000545686 MFSD6LQ8IWD5 586 aa8.82□□□□□ -1
TDP1-204ENST00000545686 KLHL23Q8NBE8 558 aa8.82□□□□□ -1
TDP1-204ENST00000545686 RNF169Q8NCN4 708 aa8.82□□□□□ -1
TDP1-204ENST00000545686 HEXDCQ8WVB3 486 aa8.82□□□□□ -1
TDP1-204ENST00000545686 RANBP9Q96S59 729 aa8.82□□□□□ -1
TDP1-204ENST00000545686 C16orf70Q9BSU1 422 aa8.82□□□□□ -1
TDP1-204ENST00000545686 EIF2AQ9BY44 585 aaKnown RBP8.82□□□□□ -1
TDP1-204ENST00000545686 OSBPL6Q9BZF3 934 aa8.82□□□□□ -1
TDP1-204ENST00000545686 PCDHAC1Q9H158 963 aa8.82□□□□□ -1
TDP1-204ENST00000545686 R3HDMLQ9H3Y0 253 aa8.82□□□□□ -1
TDP1-204ENST00000545686 CNGB3Q9NQW8 809 aa8.82□□□□□ -1
TDP1-204ENST00000545686 GJD2Q9UKL4 321 aa8.82□□□□□ -1
TDP1-204ENST00000545686 MAGED2Q9UNF1 606 aaPredicted RBP8.82□□□□□ -1
TDP1-204ENST00000545686 TCAF1Q9Y4C2 921 aa8.82□□□□□ -1
TDP1-204ENST00000545686 CSADQ9Y600 493 aa8.82□□□□□ -1
TDP1-204ENST00000545686 ZFC3H1O60293 1989 aaKnown RBP8.82□□□□□ -1
TDP1-204ENST00000545686 PTPRDP23468 1912 aa8.82□□□□□ -1
TDP1-204ENST00000545686 SH3PXD2BA1X283 911 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms