RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 HNF1BP35680 557 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 PFN3P60673 137 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 CYP4F3Q08477 520 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 KLHL30Q0D2K2 578 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 PDE1CQ14123 709 aaPredicted RBP21.38■■□□□ 1.01
SCARB1-210ENST00000545493 ARHGAP12Q8IWW6 846 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 NPWQ8N729 165 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 PDCD7Q8N8D1 485 aaKnown RBP21.38■■□□□ 1.01
SCARB1-210ENST00000545493 ZNF548Q8NEK5 533 aaPredicted RBP21.38■■□□□ 1.01
SCARB1-210ENST00000545493 ASB12Q8WXK4 309 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 RFFLQ8WZ73 363 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 ARHGEF26Q96DR7 871 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 DKK3Q9UBP4 350 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 KLF15Q9UIH9 416 aa21.38■■□□□ 1.01
SCARB1-210ENST00000545493 ADAMTS20P59510 1910 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 LY6G6EA0A0G2JKS1 128 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 TSPAN11A1L157 253 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 SYCE3A1L190 88 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 EIF3CLB5ME19 914 aaKnown RBP21.37■■□□□ 1.01
SCARB1-210ENST00000545493 PRAMEF11O60813 436 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 NME1P15531 152 aaKnown RBP21.37■■□□□ 1.01
SCARB1-210ENST00000545493 RGRP47804 291 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 NDST2P52849 883 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 SGCGQ13326 291 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 FIGNQ5HY92 759 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 ERMARDQ5T6L9 678 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 AFMIDQ63HM1 303 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 RFX8Q6ZV50 586 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 DCP2Q8IU60 420 aaKnown RBP21.37■■□□□ 1.01
SCARB1-210ENST00000545493 EIF3CQ99613 913 aaKnown RBP21.37■■□□□ 1.01
SCARB1-210ENST00000545493 EDEM3Q9BZQ6 932 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 SLC39A8Q9C0K1 460 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 CBX8Q9HC52 389 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 LHX6Q9UPM6 363 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 SCINQ9Y6U3 715 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 U3KQA8 63 aa21.37■■□□□ 1.01
SCARB1-210ENST00000545493 COL27A1Q8IZC6 1860 aaPredicted RBP21.37■■□□□ 1.01
SCARB1-210ENST00000545493 NEBLO76041 1014 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 SERPINC1P01008 464 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 CSF2P04141 144 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 TIMP2P16035 220 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 PBX1P40424 430 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 PAPOLAP51003 745 aaKnown RBP21.36■■□□□ 1.01
SCARB1-210ENST00000545493 DAB2P98082 770 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 INSM1Q01101 510 aaPredicted RBP21.36■■□□□ 1.01
SCARB1-210ENST00000545493 RAD51Q06609 339 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 HGSNATQ68CP4 663 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 ARHGAP36Q6ZRI8 547 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 LUZP1Q86V48 1076 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 ZSWIM9Q86XI8 627 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 TP53I13Q8NBR0 393 aaPredicted RBP21.36■■□□□ 1.01
SCARB1-210ENST00000545493 CXorf40AQ8TE69 158 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 CENPTQ96BT3 561 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 NCAPGQ9BPX3 1015 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 CPEB1Q9BZB8 566 aaKnown RBP21.36■■□□□ 1.01
SCARB1-210ENST00000545493 NLGN3Q9NZ94 848 aa21.36■■□□□ 1.01
SCARB1-210ENST00000545493 PNMA8BQ9ULN7 279 aaPredicted RBP21.36■■□□□ 1.01
SCARB1-210ENST00000545493 LRP4O75096 1905 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 PRPSAP2O60256 369 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 MMP20O60882 483 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 MYF5P13349 255 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 JUPP14923 745 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 TCF4P15884 667 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 ERCC2P18074 760 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 HNRNPKP61978 463 aaKnown RBP eCLIP21.35■■□□□ 1.011e-6■■■■□ 24.3
SCARB1-210ENST00000545493 EIF2B5Q13144 721 aaKnown RBP21.35■■□□□ 1.01
SCARB1-210ENST00000545493 TARDBPQ13148 414 aaKnown RBP eCLIP21.35■■□□□ 1.012e-6■■■■■ 38.5
SCARB1-210ENST00000545493 DPYSQ14117 519 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 KLHL40Q2TBA0 621 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 PPP6R3Q5H9R7 873 aaPredicted RBP21.35■■□□□ 1.01
SCARB1-210ENST00000545493 TTC7BQ86TV6 843 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 VPS36Q86VN1 386 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 NXPE2Q96DL1 559 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 WRAP53Q9BUR4 548 aaKnown RBP21.35■■□□□ 1.01
SCARB1-210ENST00000545493 ISCUQ9H1K1 167 aa21.35■■□□□ 1.01
SCARB1-210ENST00000545493 ARHGAP42A6NI28 874 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 K7ESM1 405 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 SCAMP1O15126 338 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 TM7SF2O76062 418 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 RNF8O76064 485 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 MYBL1P10243 752 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 ALPPL2P10696 532 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 CKMT1AP12532 417 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 IL1R2P27930 398 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 FANCCQ00597 558 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 TMEM52BQ4KMG9 183 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 TDRD12Q587J7 1177 aaKnown RBP21.34■■□□□ 1.01
SCARB1-210ENST00000545493 TP53INP2Q8IXH6 220 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 RBFAQ8N0V3 343 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 TRIM11Q96F44 468 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 APOLD1Q96LR9 279 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 TCEAL2Q9H3H9 227 aaPredicted RBP21.34■■□□□ 1.01
SCARB1-210ENST00000545493 MBNL1Q9NR56 388 aaKnown RBP21.34■■□□□ 1.01
SCARB1-210ENST00000545493 DONSONQ9NYP3 566 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 MYO1AQ9UBC5 1043 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 COQ6Q9Y2Z9 468 aa21.34■■□□□ 1.01
SCARB1-210ENST00000545493 H3BM21 787 aa21.33■■□□□ 1.01
SCARB1-210ENST00000545493 BUB1BO60566 1050 aaPredicted RBP21.33■■□□□ 1.01
SCARB1-210ENST00000545493 IRF4Q15306 451 aa21.33■■□□□ 1.01
SCARB1-210ENST00000545493 SMTNL2Q2TAL5 461 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms