RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 EMC1Q8N766 993 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 OR52K2Q8NGK3 314 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 OR6P1Q8NGX9 317 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 SLC30A5Q8TAD4 765 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 FRS2Q8WU20 508 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 FAM131CQ96AQ9 280 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 PLPPR2Q96GM1 343 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 RPL10LQ96L21 214 aaKnown RBP7.86□□□□□ -1.15
SNHG1-223ENST00000545440 PCDHB18PQ96TA0 734 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 ZYG11BQ9C0D3 744 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 MTG2Q9H4K7 406 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 C6orf106Q9H6K1 298 aaPredicted RBP7.86□□□□□ -1.15
SNHG1-223ENST00000545440 RETREG1Q9H6L5 497 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 FBXL12Q9NXK8 326 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 ADAM22Q9P0K1 906 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 PPARGC1AQ9UBK2 798 aaKnown RBP7.86□□□□□ -1.15
SNHG1-223ENST00000545440 ZNF212Q9UDV6 495 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 SLCO3A1Q9UIG8 710 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 TPX2Q9ULW0 747 aaKnown RBP7.86□□□□□ -1.15
SNHG1-223ENST00000545440 NCKAP1Q9Y2A7 1128 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 LRP4O75096 1905 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 MYLKQ15746 1914 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 PLXNB3Q9ULL4 1909 aa7.86□□□□□ -1.15
SNHG1-223ENST00000545440 CXorf51AA0A1B0GTR3 108 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 TCRBV5S1A1TA0A578 114 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 FAM170AA1A519 330 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 ILVBLA1L0T0 632 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SIGLEC16A6NMB1 481 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 C10orf142B7Z368 130 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 FANCGO15287 622 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 MID1O15344 667 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SLC7A4O43246 635 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 OPHN1O60890 802 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 RNGTTO60942 597 aaKnown RBP7.85□□□□□ -1.15
SNHG1-223ENST00000545440 GJB3O75712 270 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 CER1O95813 267 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 ZNF883P0CG24 379 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 KRT3P12035 628 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 GPD1P21695 349 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 CD27P26842 260 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 PMLP29590 882 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 OR1E1P30953 314 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SLC8A1P32418 973 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 PSMD8P48556 350 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 AFF3P51826 1226 aaKnown RBP7.85□□□□□ -1.15
SNHG1-223ENST00000545440 ADPRHP54922 357 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 HDAC4P56524 1084 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 KRT83P78385 493 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SCAPQ12770 1279 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SEMA3BQ13214 749 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SLC14A1Q13336 389 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 IQCB1Q15051 598 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 CDO1Q16878 200 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 C15orf59Q2T9L4 293 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-223ENST00000545440 UAP1L1Q3KQV9 507 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 CCDC14Q49A88 953 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 ARTNQ5T4W7 220 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 MANEALQ5VSG8 457 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 KIAA0895LQ68EN5 471 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 DNAJC24Q6P3W2 148 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 IL27RAQ6UWB1 636 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.85□□□□□ -1.15
SNHG1-223ENST00000545440 TFAP2DQ7Z6R9 452 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 STK40Q8N2I9 435 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 AADATQ8N5Z0 425 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 JOSD2Q8TAC2 188 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 RXFP2Q8WXD0 754 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 OR8D1Q8WZ84 308 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SNX19Q92543 992 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 CENPIQ92674 756 aaPredicted RBP7.85□□□□□ -1.15
SNHG1-223ENST00000545440 NTAN1Q96AB6 310 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 BIRC7Q96CA5 298 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 CCDC114Q96M63 670 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 PSMB7Q99436 277 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 AGPAT1Q99943 283 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 OMDQ99983 421 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SYT11Q9BT88 431 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SELENOOQ9BVL4 669 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 GTPBP2Q9BX10 602 aaKnown RBP7.85□□□□□ -1.15
SNHG1-223ENST00000545440 TTYH3Q9C0H2 523 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SLC32A1Q9H598 525 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 FSCN3Q9NQT6 498 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SEPT11Q9NVA2 429 aaKnown RBP7.85□□□□□ -1.15
SNHG1-223ENST00000545440 MPP6Q9NZW5 540 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SERGEFQ9UGK8 458 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 EIF2B4Q9UI10 523 aaKnown RBP7.85□□□□□ -1.15
SNHG1-223ENST00000545440 VPS51Q9UID3 782 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 PCDHB14Q9Y5E9 798 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 SNX10Q9Y5X0 201 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 CACNA1BQ00975 2339 aa7.85□□□□□ -1.15
SNHG1-223ENST00000545440 GOLGA4Q13439 2230 aaKnown RBP7.84□□□□□ -1.15
SNHG1-223ENST00000545440 CHD8Q9HCK8 2581 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 A0A0D9SEW6 157 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 SYCE3A1L190 88 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 ANKRD62A6NC57 917 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 LRRC72A6NJI9 287 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 LRRC53A6NM62 1247 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 C1QTNF3-AMACRE9PGA6 284 aa7.84□□□□□ -1.15
SNHG1-223ENST00000545440 F8W735 103 aaPredicted RBP7.84□□□□□ -1.15
SNHG1-223ENST00000545440 MCF2LO15068 1137 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms