RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 ALPIP09923 528 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 CTSEP14091 401 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 TFE3P19532 575 aaPredicted RBP9.52□□□□□ -0.89
CHD4-212ENST00000545083 CMA1P23946 247 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 CCR10P46092 362 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 NDUFA8P51970 172 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 CACNA1DQ01668 2161 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 IRF4Q15306 451 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 KLHL40Q2TBA0 621 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 LRRK1Q38SD2 2015 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 EFHC2Q5JST6 749 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 DOPEY1Q5JWR5 2465 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 RD3Q7Z3Z2 195 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 SETD3Q86TU7 594 aaPredicted RBP9.52□□□□□ -0.89
CHD4-212ENST00000545083 WDTC1Q8N5D0 677 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 C9orf43Q8TAL5 461 aaPredicted RBP9.52□□□□□ -0.89
CHD4-212ENST00000545083 SCG3Q8WXD2 468 aaKnown RBP9.52□□□□□ -0.89
CHD4-212ENST00000545083 RAB7BQ96AH8 199 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 TMEM159Q96B96 161 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 CPXM1Q96SM3 734 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 EPAS1Q99814 870 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 SPON2Q9BUD6 331 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 RDH14Q9HBH5 336 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 METTL14Q9HCE5 456 aaKnown RBP9.52□□□□□ -0.89
CHD4-212ENST00000545083 PIGVQ9NUD9 493 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 HECAQ9UBI9 543 aaPredicted RBP9.52□□□□□ -0.89
CHD4-212ENST00000545083 ARMCX3Q9UH62 379 aaPredicted RBP9.52□□□□□ -0.89
CHD4-212ENST00000545083 CNTN6Q9UQ52 1028 aa9.52□□□□□ -0.89
CHD4-212ENST00000545083 TRIM49BA6NDI0 452 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ENO4A6NNW6 628 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 NKX2-8O15522 239 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 DUX1O43812 170 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 HSF2BPO75031 334 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 TM7SF2O76062 418 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 LETM1O95202 739 aaPredicted RBP9.51□□□□□ -0.89
CHD4-212ENST00000545083 RASGRP1O95267 797 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 UGT2B4P06133 528 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 GLI1P08151 1106 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 RNF224P0DH78 156 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ZSCAN22P10073 491 aaPredicted RBP9.51□□□□□ -0.89
CHD4-212ENST00000545083 FGF3P11487 239 aaPredicted RBP9.51□□□□□ -0.89
CHD4-212ENST00000545083 GLB1P16278 677 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 OR1E1P30953 314 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 UGT1A3P35503 534 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 PRCPP42785 496 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 SYKP43405 635 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 CD97P48960 835 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 BLKP51451 505 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 B4GALNT1Q00973 533 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 PKP1Q13835 747 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 MEA1Q16626 185 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ARHGAP44Q17R89 818 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ZNF805Q5CZA5 627 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 CERCAMQ5T4B2 595 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ANKRD40Q6AI12 368 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 OGFOD3Q6PK18 319 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ENPP7Q6UWV6 458 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 FAM183BPQ6ZVS7 135 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 GKN2Q86XP6 184 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 RCBTB1Q8NDN9 531 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 OR6C4Q8NGE1 309 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ZNF606Q8WXB4 792 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 PDXPQ96GD0 296 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ABHD17AQ96GS6 310 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 KLHL32Q96NJ5 620 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 B3GNT4Q9C0J1 378 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 TKTL2Q9H0I9 626 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ATP13A1Q9HD20 1204 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ASNSD1Q9NWL6 643 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 ARHGEF38Q9NXL2 777 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 COQ6Q9Y2Z9 468 aa9.51□□□□□ -0.89
CHD4-212ENST00000545083 IGLV3-10A0A075B6K4 115 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 FAM237AA0A1B0GTK4 181 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 ILVBLA1L0T0 632 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 PMM2O15305 246 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 THAP12O43422 761 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 B4GAT1O43505 415 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 DAB1O75553 588 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 KRT5P13647 590 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 PNLIPP16233 465 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 NR1D1P20393 614 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 ACVRL1P37023 503 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 UQCRFS1P47985 274 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 CXCR3P49682 368 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 ATP1A2P50993 1020 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 MLLT10P55197 1068 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 SRP54P61011 504 aaKnown RBP9.5□□□□□ -0.89
CHD4-212ENST00000545083 FKBP3Q00688 224 aaKnown RBP9.5□□□□□ -0.89
CHD4-212ENST00000545083 GCNT1Q02742 428 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 SLC20A2Q08357 652 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 HLTFQ14527 1009 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHD4-212ENST00000545083 WSCD2Q2TBF2 565 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 MAP9Q49MG5 647 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 TMEM164Q5U3C3 297 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 ERICH6BQ5W0A0 696 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 RETSATQ6NUM9 610 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 OLFML1Q6UWY5 402 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 KRBA2Q6ZNG9 492 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 CACNA2D3Q8IZS8 1091 aa9.5□□□□□ -0.89
CHD4-212ENST00000545083 RYBPQ8N488 228 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms