RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 FAXCQ5TGI0 409 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 LRRC31Q6UY01 552 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 VPS36Q86VN1 386 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 JAMLQ86YT9 394 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 PASD1Q8IV76 773 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 SDR16C5Q8N3Y7 309 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 FSTL5Q8N475 847 aaPredicted RBP13.01□□□□□ -0.33
USP28-212ENST00000544750 PCDH19Q8TAB3 1148 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 SHC3Q92529 594 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 FUCA2Q9BTY2 467 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 SPON2Q9BUD6 331 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 TM6SF2Q9BZW4 377 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 STRADBQ9C0K7 418 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 LRRN3Q9H3W5 708 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 SYNDIG1Q9H7V2 258 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 ATP13A1Q9HD20 1204 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 ANKMY1Q9P2S6 941 aa13.01□□□□□ -0.33
USP28-212ENST00000544750 USP9YO00507 2555 aaPredicted RBP13.01□□□□□ -0.33
USP28-212ENST00000544750 CLEC18AA5D8T8 446 aa13□□□□□ -0.33
USP28-212ENST00000544750 RPLP0P05388 317 aaKnown RBP13□□□□□ -0.33
USP28-212ENST00000544750 ITIH1P19827 911 aa13□□□□□ -0.33
USP28-212ENST00000544750 ETV5P41161 510 aa13□□□□□ -0.33
USP28-212ENST00000544750 SULT1E1P49888 294 aa13□□□□□ -0.33
USP28-212ENST00000544750 DNA2P51530 1060 aa13□□□□□ -0.33
USP28-212ENST00000544750 HK3P52790 923 aa13□□□□□ -0.33
USP28-212ENST00000544750 PPARDQ03181 441 aa13□□□□□ -0.33
USP28-212ENST00000544750 TLE1Q04724 770 aa13□□□□□ -0.33
USP28-212ENST00000544750 CLCA4Q14CN2 919 aa13□□□□□ -0.33
USP28-212ENST00000544750 TRIM65Q6PJ69 517 aa13□□□□□ -0.33
USP28-212ENST00000544750 CLEC18BQ6UXF7 455 aa13□□□□□ -0.33
USP28-212ENST00000544750 NYAP1Q6ZVC0 841 aa13□□□□□ -0.33
USP28-212ENST00000544750 VASH2Q86V25 355 aa13□□□□□ -0.33
USP28-212ENST00000544750 CLEC18CQ8NCF0 446 aa13□□□□□ -0.33
USP28-212ENST00000544750 OR6K2Q8NGY2 324 aa13□□□□□ -0.33
USP28-212ENST00000544750 ARHGEF26Q96DR7 871 aa13□□□□□ -0.33
USP28-212ENST00000544750 TMEM74Q96NL1 305 aa13□□□□□ -0.33
USP28-212ENST00000544750 GBP4Q96PP9 640 aa13□□□□□ -0.33
USP28-212ENST00000544750 TBCBQ99426 244 aa13□□□□□ -0.33
USP28-212ENST00000544750 CPEB1Q9BZB8 566 aaKnown RBP13□□□□□ -0.33
USP28-212ENST00000544750 EDEM3Q9BZQ6 932 aa13□□□□□ -0.33
USP28-212ENST00000544750 SLC25A18Q9H1K4 315 aa13□□□□□ -0.33
USP28-212ENST00000544750 NUP62CLQ9H1M0 184 aa13□□□□□ -0.33
USP28-212ENST00000544750 GEMIN8Q9NWZ8 242 aaKnown RBP13□□□□□ -0.33
USP28-212ENST00000544750 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13□□□□□ -0.33
USP28-212ENST00000544750 GULP1Q9UBP9 304 aa13□□□□□ -0.33
USP28-212ENST00000544750 PISDQ9UG56 409 aa13□□□□□ -0.33
USP28-212ENST00000544750 STAP1Q9ULZ2 295 aa13□□□□□ -0.33
USP28-212ENST00000544750 LOXL2Q9Y4K0 774 aa13□□□□□ -0.33
USP28-212ENST00000544750 SPENQ96T58 3664 aaKnown RBP13□□□□□ -0.33
USP28-212ENST00000544750 PRAMEF33A0A0G2JMD5 474 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 BICDL2A1A5D9 508 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.99□□□□□ -0.33
USP28-212ENST00000544750 NEMP1O14524 444 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 PRAMEF10O60809 474 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 MMP20O60882 483 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 SRGAP2O75044 1071 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 PPFIA2O75334 1257 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 TM7SF2O76062 418 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 GSRP00390 522 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 F9P00740 461 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 UGT2B4P06133 528 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 JMJD7P0C870 316 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 ITIH2P19823 946 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 ACVRL1P37023 503 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 PEX5P50542 639 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 BLKP51451 505 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 APBA1Q02410 837 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 DEUP1Q05D60 604 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 ELOCQ15369 112 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 ALG11Q2TAA5 492 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 SLC25A52Q3SY17 297 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 MANEAQ5SRI9 462 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 SMYD5Q6GMV2 418 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 TRNP1Q6NT89 227 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 ZFAND4Q86XD8 727 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 ZDHHC17Q8IUH5 632 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 GPR156Q8NFN8 814 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 OR6C4Q8NGE1 309 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 OR2AP1Q8NGE2 309 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 ARHGEF2Q92974 986 aaKnown RBP12.99□□□□□ -0.33
USP28-212ENST00000544750 KLHL32Q96NJ5 620 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 HAPLN3Q96S86 360 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 EPAS1Q99814 870 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 ZYG11BQ9C0D3 744 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 NDFIP2Q9NV92 336 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 FOXJ2Q9P0K8 574 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 SIRPGQ9P1W8 387 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 PPARGC1AQ9UBK2 798 aaKnown RBP12.99□□□□□ -0.33
USP28-212ENST00000544750 APPL1Q9UKG1 709 aa12.99□□□□□ -0.33
USP28-212ENST00000544750 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP28-212ENST00000544750 A0A1W2PQC6 194 aa12.98□□□□□ -0.33
USP28-212ENST00000544750 C9orf172C9J069 976 aa12.98□□□□□ -0.33
USP28-212ENST00000544750 GNA14O95837 355 aa12.98□□□□□ -0.33
USP28-212ENST00000544750 NTRK1P04629 796 aa12.98□□□□□ -0.33
USP28-212ENST00000544750 ALPIP09923 528 aa12.98□□□□□ -0.33
USP28-212ENST00000544750 SLC9A1P19634 815 aa12.98□□□□□ -0.33
USP28-212ENST00000544750 CLCN1P35523 988 aa12.98□□□□□ -0.33
USP28-212ENST00000544750 FLT3P36888 993 aa12.98□□□□□ -0.33
USP28-212ENST00000544750 SCNN1AP37088 669 aa12.98□□□□□ -0.33
USP28-212ENST00000544750 GABRB2P47870 512 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms