RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 FOXR1Q6PIV2 292 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 IRF2BP2Q7Z5L9 587 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 MCOLN2Q8IZK6 566 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 TMEM145Q8NBT3 493 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 CCDC97Q96F63 343 aaPredicted RBP16.46■□□□□ 0.23
DDX55-212ENST00000544738 MCEEQ96PE7 176 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 MAGEB5Q9BZ81 275 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 UCKL1Q9NWZ5 548 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 HECAQ9UBI9 543 aaPredicted RBP16.46■□□□□ 0.23
DDX55-212ENST00000544738 NEU3Q9UQ49 428 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
DDX55-212ENST00000544738 SPTAN1Q13813 2472 aaKnown RBP16.45■□□□□ 0.22
DDX55-212ENST00000544738 TEX33O43247 280 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 CCP110O43303 1012 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 KDELR3O43731 214 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 AP1G1O43747 822 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 POP4O95707 220 aaKnown RBP16.45■□□□□ 0.22
DDX55-212ENST00000544738 GSRP00390 522 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 THEGLP0DJG4 465 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 ADRB3P13945 408 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 PRLRP16471 622 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 DGKAP23743 735 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 YBEYP58557 167 aaPredicted RBP16.45■□□□□ 0.22
DDX55-212ENST00000544738 RPL7AP62424 266 aaKnown RBP16.45■□□□□ 0.22
DDX55-212ENST00000544738 RPS21P63220 83 aaKnown RBP16.45■□□□□ 0.22
DDX55-212ENST00000544738 PPP1R15BQ5SWA1 713 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 DCP2Q8IU60 420 aaKnown RBP16.45■□□□□ 0.22
DDX55-212ENST00000544738 RTL3Q8N8U3 475 aaKnown RBP16.45■□□□□ 0.22
DDX55-212ENST00000544738 OR2AP1Q8NGE2 309 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 OR4C6Q8NH72 309 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 CASKIN2Q8WXE0 1202 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 KLK6Q92876 244 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 RAB7BQ96AH8 199 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 SLC46A1Q96NT5 459 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 EPAS1Q99814 870 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 ARHGAP9Q9BRR9 750 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 TM6SF2Q9BZW4 377 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 ZDHHC6Q9H6R6 413 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 CATSPERBQ9H7T0 1116 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 DONSONQ9NYP3 566 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 ANKMY1Q9P2S6 941 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 FZD10Q9ULW2 581 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 CA5BQ9Y2D0 317 aa16.45■□□□□ 0.22
DDX55-212ENST00000544738 RNF103O00237 685 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 CKMT1AP12532 417 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 HTR7P34969 479 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 ZNF165P49910 485 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 RAD51Q06609 339 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 TMEM259Q4ZIN3 620 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 INO80DQ53TQ3 878 aaPredicted RBP16.44■□□□□ 0.22
DDX55-212ENST00000544738 ZNF354CQ86Y25 554 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 PYROXD2Q8N2H3 581 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 RYBPQ8N488 228 aaPredicted RBP16.44■□□□□ 0.22
DDX55-212ENST00000544738 MAPK15Q8TD08 544 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 ARHGEF26Q96DR7 871 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 OSBPL1AQ9BXW6 950 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 SLC17A9Q9BYT1 436 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 PARVAQ9NVD7 372 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.44■□□□□ 0.22
DDX55-212ENST00000544738 ZFR2Q9UPR6 939 aaKnown RBP16.44■□□□□ 0.22
DDX55-212ENST00000544738 FADS3Q9Y5Q0 445 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 ACTL7AQ9Y615 435 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 HS3ST3A1Q9Y663 406 aa16.44■□□□□ 0.22
DDX55-212ENST00000544738 TLN1Q9Y490 2541 aaKnown RBP16.44■□□□□ 0.22
DDX55-212ENST00000544738 LRRK2Q5S007 2527 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 A0A1W2PQC6 194 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 WASH4PA8MWX3 477 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 EIF3CLB5ME19 914 aaKnown RBP16.43■□□□□ 0.22
DDX55-212ENST00000544738 KRIT1O00522 736 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 FGF10O15520 208 aaPredicted RBP16.43■□□□□ 0.22
DDX55-212ENST00000544738 TSPAN6O43657 245 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 BUB1O43683 1085 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 CREB3O43889 395 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 SGCGQ13326 291 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 ISXQ2M1V0 245 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 MYLK3Q32MK0 819 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 LINC00303Q3SY05 128 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 PARP15Q460N3 678 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 ZNF805Q5CZA5 627 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 PARS2Q7L3T8 475 aaKnown RBP16.43■□□□□ 0.22
DDX55-212ENST00000544738 IFT43Q96FT9 208 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 ATXN7L3BQ96GX2 97 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 APOLD1Q96LR9 279 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 GDAP1L1Q96MZ0 367 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 EIF3CQ99613 913 aaKnown RBP16.43■□□□□ 0.22
DDX55-212ENST00000544738 MYOCQ99972 504 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 SYT11Q9BT88 431 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 CALN1Q9BXU9 219 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 CAAP1Q9H8G2 361 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 KLHL11Q9NVR0 708 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 CHD5Q8TDI0 1954 aa16.43■□□□□ 0.22
DDX55-212ENST00000544738 A0A1W2PNU3 283 aaPredicted RBP16.42■□□□□ 0.22
DDX55-212ENST00000544738 LRRC53A6NM62 1247 aa16.42■□□□□ 0.22
DDX55-212ENST00000544738 C16orf96A6NNT2 1141 aa16.42■□□□□ 0.22
DDX55-212ENST00000544738 A6NNZ2 444 aa16.42■□□□□ 0.22
DDX55-212ENST00000544738 NEMP1O14524 444 aa16.42■□□□□ 0.22
DDX55-212ENST00000544738 GZMAP12544 262 aa16.42■□□□□ 0.22
DDX55-212ENST00000544738 MAPK8IP2Q13387 824 aaPredicted RBP16.42■□□□□ 0.22
DDX55-212ENST00000544738 MAMLD1Q13495 774 aa16.42■□□□□ 0.22
DDX55-212ENST00000544738 SERINC3Q13530 473 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms