RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 POU2F2P09086 479 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 MYL4P12829 197 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 GLDCP23378 1020 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 CSRP3P50461 194 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 ARF5P84085 180 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 ACVR1Q04771 509 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 CAMK1Q14012 370 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 PDE1CQ14123 709 aaPredicted RBP12.87□□□□□ -0.35
PAAF1-214ENST00000544552 FSCBQ5H9T9 825 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 KIAA0408Q6ZU52 694 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 SPATA21Q7Z572 469 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 GALNT7Q86SF2 657 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 ZC3HC1Q86WB0 502 aaKnown RBP12.87□□□□□ -0.35
PAAF1-214ENST00000544552 CARNMT1Q8N4J0 409 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 DCLK2Q8N568 766 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 DCAF4L2Q8NA75 395 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 TDRD5Q8NAT2 981 aaKnown RBP12.87□□□□□ -0.35
PAAF1-214ENST00000544552 RAB3IL1Q8TBN0 382 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 MICAL1Q8TDZ2 1067 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 VPS39Q96JC1 886 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 SAMD11Q96NU1 681 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 NUDCD1Q96RS6 583 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 GPR22Q99680 433 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 C12orf65Q9H3J6 166 aaKnown RBP12.87□□□□□ -0.35
PAAF1-214ENST00000544552 CFAP97Q9P2B7 532 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 ZMYM5Q9UJ78 669 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 PHTF1Q9UMS5 762 aa12.87□□□□□ -0.35
PAAF1-214ENST00000544552 LEFTY2O00292 366 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 CDH18Q13634 790 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 THOC5Q13769 683 aaKnown RBP12.86□□□□□ -0.35
PAAF1-214ENST00000544552 NEPROQ6NW34 567 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 LCA5Q86VQ0 697 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 C2CD4AQ8NCU7 369 aaPredicted RBP12.86□□□□□ -0.35
PAAF1-214ENST00000544552 FIBINQ8TAL6 211 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 SHKBP1Q8TBC3 707 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 BRSK1Q8TDC3 778 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 PTPRN2Q92932 1015 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 ACDQ96AP0 544 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 TASP1Q9H6P5 420 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 NOD2Q9HC29 1040 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 SNX15Q9NRS6 342 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 SIRPGQ9P1W8 387 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 SLC2A6Q9UGQ3 507 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 DPP7Q9UHL4 492 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 ARL2BPQ9Y2Y0 163 aa12.86□□□□□ -0.35
PAAF1-214ENST00000544552 MTO1Q9Y2Z2 717 aaKnown RBP12.86□□□□□ -0.35
PAAF1-214ENST00000544552 TTC24A2A3L6 582 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-214ENST00000544552 LDB2O43679 373 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 AHSGP02765 367 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 PSMA3P25788 255 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 MZF1P28698 734 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-214ENST00000544552 CCR2P41597 374 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 SCNN1BP51168 640 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 PLK1P53350 603 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 IFT88Q13099 833 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 SEPT6Q14141 434 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 ZKSCAN8Q15776 578 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-214ENST00000544552 CGB2Q6NT52 195 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 METTL3Q86U44 580 aaKnown RBP12.85□□□□□ -0.35
PAAF1-214ENST00000544552 BBS7Q8IWZ6 715 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 CMTM8Q8IZV2 173 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 OR13J1Q8NGT2 312 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 DDI1Q8WTU0 396 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 PRO3102Q9H379 93 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 SCUBE2Q9NQ36 999 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 MAN1C1Q9NR34 630 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 KIAA1522Q9P206 1035 aaPredicted RBP12.85□□□□□ -0.35
PAAF1-214ENST00000544552 ACTL7AQ9Y615 435 aa12.85□□□□□ -0.35
PAAF1-214ENST00000544552 A0A1W2PPC1 479 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 WDR91A4D1P6 747 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 NRG2O14511 850 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GRM6O15303 877 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 CLASP2O75122 1294 aaKnown RBP12.84□□□□□ -0.35
PAAF1-214ENST00000544552 XYLBO75191 536 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 MOSPD3O75425 235 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 KIAA0754O94854 1291 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 TMCC1O94876 653 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 TGDSO95455 350 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 BPGMP07738 259 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 RHOP08100 348 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GJA1P17302 382 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GABRB3P28472 473 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 RGRP47804 291 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 SLC20A2Q08357 652 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 SLC12A1Q13621 1099 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 RAB30Q15771 203 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 CCDC153Q494R4 210 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 ARHGAP15Q53QZ3 475 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 GPR158Q5T848 1215 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 RETSATQ6NUM9 610 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 FAM47EQ6ZV65 393 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 MFN1Q8IWA4 741 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 ARMC2Q8NEN0 867 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 ZNF398Q8TD17 642 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 C2orf49Q9BVC5 232 aaPredicted RBP12.84□□□□□ -0.35
PAAF1-214ENST00000544552 KDM4CQ9H3R0 1056 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 MFSD1Q9H3U5 465 aa12.84□□□□□ -0.35
PAAF1-214ENST00000544552 SLCO1B3Q9NPD5 702 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms