RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 GRM2Q14416 872 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 POU6F1Q14863 301 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 EFTUD2Q15029 972 aaKnown RBP eCLIP30.74■■■□□ 2.51
CCM2-219ENST00000544363 KBTBD12Q3ZCT8 623 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 ARMC3Q5W041 872 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 RIBC1Q8N443 379 aaPredicted RBP30.74■■■□□ 2.51
CCM2-219ENST00000544363 SH2D3CQ8N5H7 860 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 WFIKKN2Q8TEU8 576 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 PTCD2Q8WV60 388 aaKnown RBP30.74■■■□□ 2.51
CCM2-219ENST00000544363 SUSD6Q92537 303 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 FGF14Q92915 247 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 ISG20Q96AZ6 181 aaKnown RBP30.74■■■□□ 2.51
CCM2-219ENST00000544363 TM6SF2Q9BZW4 377 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 CHRAC1Q9NRG0 131 aa30.74■■■□□ 2.51
CCM2-219ENST00000544363 ECI2O75521 394 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 ZNF821O75541 412 aaPredicted RBP30.73■■■□□ 2.51
CCM2-219ENST00000544363 NDST3O95803 873 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 FGF1P05230 155 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 AP1S1P61966 158 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 NR1H3Q13133 447 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 ANKRD20A4Q4UJ75 823 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 TRMT10BQ6PF06 316 aaKnown RBP30.73■■■□□ 2.51
CCM2-219ENST00000544363 CES3Q6UWW8 571 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 CPA6Q8N4T0 437 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 PPHLN1Q8NEY8 458 aaKnown RBP30.73■■■□□ 2.51
CCM2-219ENST00000544363 FCRL3Q96P31 734 aaPredicted RBP30.73■■■□□ 2.51
CCM2-219ENST00000544363 TDRD1Q9BXT4 1180 aaKnown RBP30.73■■■□□ 2.51
CCM2-219ENST00000544363 EURLQ9NYK6 297 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 VPS18Q9P253 973 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 USP15Q9Y4E8 981 aaPredicted RBP30.73■■■□□ 2.51
CCM2-219ENST00000544363 RAI2Q9Y5P3 530 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 MSLNQ13421 630 aaPredicted RBP30.73■■■□□ 2.51
CCM2-219ENST00000544363 DGKKQ5KSL6 1271 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 PKN3Q6P5Z2 889 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 ZNF669Q96BR6 464 aaPredicted RBP30.73■■■□□ 2.51
CCM2-219ENST00000544363 CEP44Q9C0F1 390 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 MRM3Q9HC36 420 aaKnown RBP30.73■■■□□ 2.51
CCM2-219ENST00000544363 CTNNAL1Q9UBT7 734 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 LGALS13Q9UHV8 139 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 CHKBQ9Y259 395 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 PCDHGC4Q9Y5F7 938 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 FAM169AQ9Y6X4 670 aa30.73■■■□□ 2.51
CCM2-219ENST00000544363 SZT2Q5T011 3432 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 PIAS1O75925 651 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 ADRA1DP25100 572 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 RUNX3Q13761 415 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 RASA2Q15283 850 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 LRCH3Q96II8 777 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 PAFAH2Q99487 392 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 DHRS4Q9BTZ2 278 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 EPS15L1Q9UBC2 864 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 NOVA2Q9UNW9 492 aaKnown RBP30.72■■■□□ 2.51
CCM2-219ENST00000544363 ERVW-1Q9UQF0 538 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 TCAF1Q9Y4C2 921 aa30.72■■■□□ 2.51
CCM2-219ENST00000544363 FAM159BA6NKW6 160 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 IGSF6O95976 241 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 MAPK8P45983 427 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 FRG1Q14331 258 aaKnown RBP30.71■■■□□ 2.51
CCM2-219ENST00000544363 SKIDA1Q1XH10 827 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 TNFAIP8L3Q5GJ75 292 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 C22orf39Q6P5X5 142 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 MTSS1LQ765P7 747 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 SERBP1Q8NC51 408 aaKnown RBP eCLIP30.71■■■□□ 2.51
CCM2-219ENST00000544363 TLCD1Q96CP7 247 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 MRRFQ96E11 262 aaKnown RBP30.71■■■□□ 2.51
CCM2-219ENST00000544363 MFSD3Q96ES6 412 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 RANBP9Q96S59 729 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 STMN4Q9H169 189 aaPredicted RBP30.71■■■□□ 2.51
CCM2-219ENST00000544363 TNKS2Q9H2K2 1166 aa30.71■■■□□ 2.51
CCM2-219ENST00000544363 ZCWPW2A0A1B0GU75 182 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 PRLP01236 227 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 ALADP13716 330 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 MSH2P43246 934 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 SLC6A11P48066 632 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 TRAF2Q12933 501 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 GALNT3Q14435 633 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 OR2AP1Q8NGE2 309 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 SMYD2Q9NRG4 433 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 PSMC3IPQ9P2W1 217 aaPredicted RBP30.7■■■□□ 2.51
CCM2-219ENST00000544363 DEC1Q9P2X7 70 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 PRKAG3Q9UGI9 489 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 EVLQ9UI08 416 aaPredicted RBP30.7■■■□□ 2.51
CCM2-219ENST00000544363 SLCO3A1Q9UIG8 710 aa30.7■■■□□ 2.51
CCM2-219ENST00000544363 CA4P22748 312 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 NMBRP28336 390 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 SNRPD1P62314 119 aaKnown RBP30.69■■■□□ 2.5
CCM2-219ENST00000544363 GRAMD4Q6IC98 578 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 ZNF449Q6P9G9 518 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 ADGRD1Q6QNK2 874 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 UNC5BQ8IZJ1 945 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 PCDH20Q8N6Y1 951 aaKnown RBP30.69■■■□□ 2.5
CCM2-219ENST00000544363 SLC44A1Q8WWI5 657 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 RPP25Q9BUL9 199 aaKnown RBP30.69■■■□□ 2.5
CCM2-219ENST00000544363 TRMT61BQ9BVS5 477 aaKnown RBP30.69■■■□□ 2.5
CCM2-219ENST00000544363 TBK1Q9UHD2 729 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP30.69■■■□□ 2.5
CCM2-219ENST00000544363 HEATR9A2RTY3 570 aa30.69■■■□□ 2.5
CCM2-219ENST00000544363 CXorf49A8MYA2 514 aaPredicted RBP30.69■■■□□ 2.5
CCM2-219ENST00000544363 H3BQ06 376 aaPredicted RBP30.69■■■□□ 2.5
CCM2-219ENST00000544363 GSRP00390 522 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms