RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 SUV39H2Q9H5I1 410 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 GLOD4Q9HC38 313 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 TRHDEQ9UKU6 1024 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 FZD4Q9ULV1 537 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 ZNF148Q9UQR1 794 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 HCN4Q9Y3Q4 1203 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 PCDHGC4Q9Y5F7 938 aa13.77□□□□□ -0.21
SP140-213ENST00000543928 NUMA1Q14980 2115 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 ANKRD36A6QL64 1941 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 C16orf96A6NNT2 1141 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 HRO43593 1189 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 LILRB5O75023 590 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 ITGAVP06756 1048 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 NFKB1P19838 968 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 BCKDHBP21953 392 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 CD6P30203 668 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 CNR2P34972 360 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 CD86P42081 329 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 NEK3P51956 506 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 PTPN5P54829 565 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 GDF10P55107 478 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 TRAF2Q12933 501 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 IHHQ14623 411 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 CFAP58Q5T655 872 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 PIP5KL1Q5T9C9 394 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 ANKRD20A1Q5TYW2 823 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 AGBL4Q5VU57 503 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 ANKRD20A3Q5VUR7 823 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 FBXL19Q6PCT2 694 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 DRICH1Q6PGQ1 229 aaPredicted RBP13.76□□□□□ -0.21
SP140-213ENST00000543928 ZC3H14Q6PJT7 736 aaKnown RBP13.76□□□□□ -0.21
SP140-213ENST00000543928 PARS2Q7L3T8 475 aaKnown RBP13.76□□□□□ -0.21
SP140-213ENST00000543928 PAF1Q8N7H5 531 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 CCDC110Q8TBZ0 833 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 FAM131CQ96AQ9 280 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 IMP4Q96G21 291 aaKnown RBP13.76□□□□□ -0.21
SP140-213ENST00000543928 TOE1Q96GM8 510 aaKnown RBP13.76□□□□□ -0.21
SP140-213ENST00000543928 SPATA13Q96N96 652 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 BTBD1Q9H0C5 482 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 HOMER3Q9NSC5 361 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 WSB2Q9NYS7 404 aaPredicted RBP13.76□□□□□ -0.21
SP140-213ENST00000543928 DKK3Q9UBP4 350 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 MBD1Q9UIS9 605 aaPredicted RBP13.76□□□□□ -0.21
SP140-213ENST00000543928 RAI2Q9Y5P3 530 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 R4GN57 208 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 WDFY4Q6ZS81 3184 aa13.76□□□□□ -0.21
SP140-213ENST00000543928 PLXND1Q9Y4D7 1925 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 TSPAN11A1L157 253 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 C5orf60A6NFR6 353 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 F5H423 210 aaPredicted RBP13.75□□□□□ -0.21
SP140-213ENST00000543928 TRAFD1O14545 582 aaPredicted RBP13.75□□□□□ -0.21
SP140-213ENST00000543928 SLC7A4O43246 635 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 MAP3K13O43283 966 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 SOCS5O75159 536 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 MMP2P08253 660 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 SERPINF2P08697 491 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 ADRB3P13945 408 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 STIP1P31948 543 aaKnown RBP13.75□□□□□ -0.21
SP140-213ENST00000543928 ACSL1P33121 698 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 SKOR1P84550 965 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 CCDC15Q0P6D6 951 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 ITPRIPL1Q6GPH6 555 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 CEP68Q76N32 757 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 PRPF39Q86UA1 669 aaKnown RBP13.75□□□□□ -0.21
SP140-213ENST00000543928 ZSWIM9Q86XI8 627 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 OR14C36Q8NHC7 312 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 HCAR2Q8TDS4 363 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 PDCD6IPQ8WUM4 868 aaKnown RBP13.75□□□□□ -0.21
SP140-213ENST00000543928 ATOH1Q92858 354 aaPredicted RBP13.75□□□□□ -0.21
SP140-213ENST00000543928 MAGOHBQ96A72 148 aaKnown RBP13.75□□□□□ -0.21
SP140-213ENST00000543928 ECHDC3Q96DC8 303 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 RBM15Q96T37 977 aaKnown RBP eCLIP13.75□□□□□ -0.21
SP140-213ENST00000543928 IRF2BPLQ9H1B7 796 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 GBA3Q9H227 469 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 SGK2Q9HBY8 427 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 RSPH14Q9UHP6 348 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 DRG1Q9Y295 367 aaKnown RBP13.75□□□□□ -0.21
SP140-213ENST00000543928 ABCA7Q8IZY2 2146 aa13.75□□□□□ -0.21
SP140-213ENST00000543928 FANCMQ8IYD8 2048 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 GOLGA6L10A0A0M3HER8 536 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 FAM47DPA6NHR8 397 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 KIF2AO00139 706 aaPredicted RBP13.74□□□□□ -0.21
SP140-213ENST00000543928 HTRA2O43464 458 aaPredicted RBP13.74□□□□□ -0.21
SP140-213ENST00000543928 OPHN1O60890 802 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 NDUFS2O75306 463 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 GCATO75600 419 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 SEMA4FO95754 770 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 IFNB1P01574 187 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 TUBB4AP04350 444 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 TIMP2P16035 220 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 ABL2P42684 1182 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 PAFAH1B1P43034 410 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 KCNJ1P48048 391 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 ADPRHP54922 357 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 RPL6Q02878 288 aaKnown RBP13.74□□□□□ -0.21
SP140-213ENST00000543928 SIM2Q14190 667 aaPredicted RBP13.74□□□□□ -0.21
SP140-213ENST00000543928 CYP1B1Q16678 543 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 LRRC73Q5JTD7 316 aa13.74□□□□□ -0.21
SP140-213ENST00000543928 BRAT1Q6PJG6 821 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms