RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 HDAC10Q969S8 669 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 MFSD3Q96ES6 412 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 ZNF341Q9BYN7 854 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 MARCH7Q9H992 704 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 CNTNAP4Q9C0A0 1308 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 NEMP2A6NFY4 417 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 TCP10L2B9ZVM9 353 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 SNRPB2P08579 225 aaKnown RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 ASPAP45381 313 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 LIMK2P53671 638 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 TMBIM6P55061 237 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 IMPG1Q17R60 797 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 ARHGEF16Q5VV41 709 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 MCRS1Q96EZ8 462 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 IL12RB2Q99665 862 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 CCDC90BQ9GZT6 254 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 AP3B1O00203 1094 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 SLC22A2O15244 555 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 NRP2O60462 931 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 TPH1P17752 444 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 PSMA4P25789 261 aaKnown RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 OXTRP30559 389 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 TPD52P55327 224 aaPredicted RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 CAPRIN1Q14444 709 aaKnown RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 INPP5AQ14642 412 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 ILDR2Q71H61 639 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 SLCO6A1Q86UG4 719 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 RAB2BQ8WUD1 216 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 EFHD2Q96C19 240 aaPredicted RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 OTUD5Q96G74 571 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 MUS81Q96NY9 551 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 UHRF1Q96T88 793 aaPredicted RBP12.78□□□□□ -0.36
SMG8-202ENST00000543872 SEPHS2Q99611 448 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 LHX5Q9H2C1 402 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 VRTNQ9H8Y1 702 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 GGA3Q9NZ52 723 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 TMX2Q9Y320 296 aa12.78□□□□□ -0.36
SMG8-202ENST00000543872 H0YCG3 227 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 DLX3O60479 287 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 RSL1D1O76021 490 aaKnown RBP12.77□□□□□ -0.36
SMG8-202ENST00000543872 DDHD2O94830 711 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 MPOP05164 745 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 SDC4P31431 198 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.36
SMG8-202ENST00000543872 SLC13A2Q13183 592 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 FXNQ16595 210 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 CCNYL2Q5T2Q4 361 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 ZYG11AQ6WRX3 759 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 CYS1Q717R9 158 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 SFRP1Q8N474 314 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 KDM1BQ8NB78 822 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 VPS39Q96JC1 886 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 ZDHHC15Q96MV8 337 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 TP63Q9H3D4 680 aaPredicted RBP12.77□□□□□ -0.36
SMG8-202ENST00000543872 PIF1Q9H611 641 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 CHRAC1Q9NRG0 131 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 SMPD3Q9NY59 655 aaPredicted RBP12.77□□□□□ -0.36
SMG8-202ENST00000543872 GPSM3Q9Y4H4 160 aa12.77□□□□□ -0.36
SMG8-202ENST00000543872 BCAS1O75363 584 aaPredicted RBP12.77□□□□□ -0.37
SMG8-202ENST00000543872 H2AFYO75367 372 aaKnown RBP12.77□□□□□ -0.37
SMG8-202ENST00000543872 MTHFD1P11586 935 aaKnown RBP12.77□□□□□ -0.37
SMG8-202ENST00000543872 TSPAN8P19075 237 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 SERPINB1P30740 379 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 ARL1P40616 181 aaPredicted RBP12.77□□□□□ -0.37
SMG8-202ENST00000543872 HLCSP50747 726 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 GRSF1Q12849 480 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMG8-202ENST00000543872 PPIL2Q13356 520 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 AQP6Q13520 282 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 GRM3Q14832 879 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 PGM5Q15124 567 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 CYP51A1Q16850 503 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 ZNF667Q5HYK9 610 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 TAS2R42Q7RTR8 314 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 PID1Q7Z2X4 250 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 ANKRD13BQ86YJ7 626 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 RNF135Q8IUD6 432 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 FAM20CQ8IXL6 584 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 FSTL5Q8N475 847 aaPredicted RBP12.77□□□□□ -0.37
SMG8-202ENST00000543872 HMGCLL1Q8TB92 370 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 RETREG1Q9H6L5 497 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 CCM2LQ9NUG4 571 aaPredicted RBP12.77□□□□□ -0.37
SMG8-202ENST00000543872 TBC1D13Q9NVG8 400 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 XPR1Q9UBH6 696 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 MTRRQ9UBK8 725 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 CD300AQ9UGN4 299 aa12.77□□□□□ -0.37
SMG8-202ENST00000543872 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 SLCO1B7G3V0H7 640 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 RNF103O00237 685 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 UBL4AP11441 157 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 RPS9P46781 194 aaKnown RBP12.76□□□□□ -0.37
SMG8-202ENST00000543872 PLK1P53350 603 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 PLA2G16P53816 162 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 NDUFA5Q16718 116 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 AGAP7PQ5VUJ5 663 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 BRSK2Q8IWQ3 736 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 SCUBE3Q8IX30 993 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 ANKRD13AQ8IZ07 590 aa12.76□□□□□ -0.37
SMG8-202ENST00000543872 TTC39CQ8N584 583 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms