RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 A0A1B0GVM2 712 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 A0A1W2PQ45 241 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 A0A1W2PQY0 241 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 A6NCN8 305 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 TCAF2A6NFQ2 919 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 LRRC72A6NJI9 287 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ISM1B1AKI9 464 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 TM9SF1O15321 606 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CHADO15335 359 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 SEC22BO75396 215 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 BAIAP3O94812 1187 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 SEC24DO94855 1032 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CST3P01034 146 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 LSP1P33241 339 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 RFC2P35250 354 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 SERPINB5P36952 375 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PSMD8P48556 350 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 TERF2Q15554 542 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CCDC85BQ15834 202 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PARP15Q460N3 678 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PTPN20Q4JDL3 420 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ATP13A4Q4VNC1 1196 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 LYPLAL1Q5VWZ2 237 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CYP20A1Q6UW02 462 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 BBS12Q6ZW61 710 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 APLFQ8IW19 511 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CYP4X1Q8N118 509 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 MDM1Q8TC05 714 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 DQX1Q8TE96 717 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ZNF473Q8WTR7 871 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 MYO19Q96H55 970 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 FUBP3Q96I24 572 aaKnown RBP eCLIP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 LGMNQ99538 433 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 SEMA4AQ9H3S1 761 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 FZD8Q9H461 694 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 GULP1Q9UBP9 304 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 BLOC1S6Q9UL45 172 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ANKRD6Q9Y2G4 727 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 GSAPA4D1B5 854 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 NRP1O14786 923 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 INPP4BO15327 924 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 NUDT14O95848 222 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 TFE3P19532 575 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 TACR2P21452 398 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ADSLP30566 484 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PBX3P40426 434 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 YBEYP58557 167 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 OCA2Q04671 838 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 MMRN1Q13201 1228 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PTPRNQ16849 979 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 STXBP5Q5T5C0 1151 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 C1QTNF12Q5T7M4 302 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CCDC81Q6ZN84 652 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CYP4Z1Q86W10 505 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 LNX1Q8TBB1 728 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 STAG3L4Q8TBR4 150 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 KLHL5Q96PQ7 755 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 IKZF4Q9H2S9 585 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ATPIF1Q9UII2 106 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PHTF1Q9UMS5 762 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ASF1AQ9Y294 204 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 KIF13AQ9H1H9 1805 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 A0A1W2PQ67 120 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 NR5A2O00482 541 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 UBDO15205 165 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ACSL4O60488 711 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 MAGEC1O60732 1142 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PSMA3P25788 255 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 RPL21P46778 160 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CPA2P48052 419 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PLK1P53350 603 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PRKAA2P54646 552 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PURAQ00577 322 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 SLC10A6Q3KNW5 377 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 INO80DQ53TQ3 878 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PHYKPLQ8IUZ5 450 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 MIER2Q8N344 545 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 FNDC5Q8NAU1 212 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 LEMD2Q8NC56 503 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 HNRNPLLQ8WVV9 542 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 SEMA4DQ92854 862 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 VPS50Q96JG6 964 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ZFYVE19Q96K21 471 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CNDP1Q96KN2 507 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 HNRNPABQ99729 332 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 SH3GL2Q99962 352 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 FAM86C1Q9NVL1 165 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 HBS1LQ9Y450 684 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PCDHGC5Q9Y5F6 944 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 URADA6NGE7 173 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 PFDN1O60925 122 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 SH3BGRLO75368 114 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 GCATO75600 419 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 C4BPAP04003 597 aaKnown RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 IFNA16P05015 189 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ABCB1P08183 1280 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 ADRA1DP25100 572 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 RPA3P35244 121 aaPredicted RBP6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 DGKGP49619 791 aa6.95□□□□□ -1.3
SRGAP1-206ENST00000543397 CYLC2Q14093 348 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms