RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 GLMNQ92990 594 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 HMCESQ96FZ2 354 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 APOLD1Q96LR9 279 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 TBATAQ96M53 351 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 DCBLD2Q96PD2 775 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 KLF6Q99612 283 aaPredicted RBP13.29□□□□□ -0.28
RTN3-212ENST00000543123 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 CPEB1Q9BZB8 566 aaKnown RBP13.29□□□□□ -0.28
RTN3-212ENST00000543123 ABCG4Q9H172 646 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 SPASTQ9UBP0 616 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 UBA2Q9UBT2 640 aaPredicted RBP13.29□□□□□ -0.28
RTN3-212ENST00000543123 ITM2BQ9Y287 266 aa13.29□□□□□ -0.28
RTN3-212ENST00000543123 IGSF10Q6WRI0 2623 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 K7ESM1 405 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 AQP9O43315 295 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 OPA1O60313 960 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 RNF8O76064 485 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 MT-CO3P00414 261 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 JUNDP17535 347 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 PSMA2P25787 234 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 RPIAP49247 311 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 ZNF135P52742 658 aaPredicted RBP13.28□□□□□ -0.28
RTN3-212ENST00000543123 CLDN6P56747 220 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 PFN3P60673 137 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 ASIC2Q16515 512 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 ZNF542PQ5EBM4 170 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 ERAP2Q6P179 960 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 TRIM11Q96F44 468 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 IL12RB2Q99665 862 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 MAGEB5Q9BZ81 275 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 NOL6Q9H6R4 1146 aaKnown RBP13.28□□□□□ -0.28
RTN3-212ENST00000543123 AP4E1Q9UPM8 1137 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 SCINQ9Y6U3 715 aa13.28□□□□□ -0.28
RTN3-212ENST00000543123 ARHGAP42A6NI28 874 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 TMEM110-MUSTN1A8MSY1 372 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 EEF2KO00418 725 aaKnown RBP13.27□□□□□ -0.29
RTN3-212ENST00000543123 TPP1O14773 563 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 DAPK3O43293 454 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 GIMD1P0DJR0 217 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 ATP1A3P13637 1013 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 BLKP51451 505 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 MAMLD1Q13495 774 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 BRAT1Q6PJG6 821 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 KDM7AQ6ZMT4 941 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 MACC1Q6ZN28 852 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 IRF2BP2Q7Z5L9 587 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 VPS36Q86VN1 386 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 PSTKQ8IV42 348 aaKnown RBP13.27□□□□□ -0.29
RTN3-212ENST00000543123 LSMEM2Q8N112 164 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 ATL2Q8NHH9 583 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 TPCN2Q8NHX9 752 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 SNIP1Q8TAD8 396 aaKnown RBP13.27□□□□□ -0.29
RTN3-212ENST00000543123 MAPK15Q8TD08 544 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 LMX1AQ8TE12 382 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 CENPTQ96BT3 561 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 GRAMD1AQ96CP6 724 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 ZNF641Q96N77 438 aaPredicted RBP13.27□□□□□ -0.29
RTN3-212ENST00000543123 TUBGCP5Q96RT8 1024 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 HSD3B7Q9H2F3 369 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 DHX35Q9H5Z1 703 aaKnown RBP13.27□□□□□ -0.29
RTN3-212ENST00000543123 ATP13A3Q9H7F0 1226 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 RTN4Q9NQC3 1192 aaKnown RBP13.27□□□□□ -0.29
RTN3-212ENST00000543123 APOBEC3BQ9UH17 382 aaKnown RBP13.27□□□□□ -0.29
RTN3-212ENST00000543123 GGT7Q9UJ14 662 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 SALL4Q9UJQ4 1053 aa13.27□□□□□ -0.29
RTN3-212ENST00000543123 LRRC53A6NM62 1247 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 EIF4E1BA6NMX2 242 aaKnown RBP13.26□□□□□ -0.29
RTN3-212ENST00000543123 SPINT1O43278 529 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 PRPSAP2O60256 369 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 BRINP1O60477 761 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 PRAMEF11O60813 436 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 MMP20O60882 483 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 NEBLO76041 1014 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 GZMAP12544 262 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 HTR1BP28222 390 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 SERPINA4P29622 427 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 EIF2S3P41091 472 aaKnown RBP13.26□□□□□ -0.29
RTN3-212ENST00000543123 PEX5P50542 639 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 RFTN1Q14699 578 aaPredicted RBP13.26□□□□□ -0.29
RTN3-212ENST00000543123 LRRC14Q15048 493 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 NR0B2Q15466 257 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 ANO6Q4KMQ2 910 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 CDCP2Q5VXM1 449 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 PLEKHA7Q6IQ23 1121 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 PAF1Q8N7H5 531 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 WDR48Q8TAF3 677 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 IFI44Q8TCB0 444 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 FNIP1Q8TF40 1166 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 SCG3Q8WXD2 468 aaKnown RBP13.26□□□□□ -0.29
RTN3-212ENST00000543123 FGF11Q92914 225 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 NAT6Q93015 286 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 EXOC2Q96KP1 924 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 WRAP53Q9BUR4 548 aaKnown RBP13.26□□□□□ -0.29
RTN3-212ENST00000543123 SUV39H2Q9H5I1 410 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 LRRC19Q9H756 370 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 SP110Q9HB58 689 aa13.26□□□□□ -0.29
RTN3-212ENST00000543123 MRPL47Q9HD33 250 aaKnown RBP13.26□□□□□ -0.29
RTN3-212ENST00000543123 LHX3Q9UBR4 397 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms