RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TBC1D17Q9HA65 648 aa28.12■■■□□ 2.09
CCM2-218ENST00000541586 MTF2Q9Y483 593 aaPredicted RBP28.12■■■□□ 2.09
CCM2-218ENST00000541586 ANTXRLA6NF34 631 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 POLR2EP19388 210 aaKnown RBP28.11■■■□□ 2.09
CCM2-218ENST00000541586 DRD1P21728 446 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 CRADDP78560 199 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 DSC2Q02487 901 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 FUT11Q495W5 492 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 PITRM1Q5JRX3 1037 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 KCTD16Q68DU8 428 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 ADIPOR2Q86V24 386 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 DNAAF3Q8N9W5 541 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 FLCNQ8NFG4 579 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 IPMKQ8NFU5 416 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 SORCS1Q8WY21 1168 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 ALG14Q96F25 216 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 ATP6V1G3Q96LB4 118 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 PLAC1Q9HBJ0 212 aa28.11■■■□□ 2.09
CCM2-218ENST00000541586 MRPS17Q9Y2R5 130 aaKnown RBP28.11■■■□□ 2.09
CCM2-218ENST00000541586 FAM170BA6NMN3 283 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 MUSKO15146 869 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 SLC12A1Q13621 1099 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 MBLAC2Q68D91 279 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 TRIM67Q6ZTA4 783 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 LINC00523Q86TU6 105 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 SUGP1Q8IWZ8 645 aaKnown RBP28.1■■■□□ 2.09
CCM2-218ENST00000541586 TBL1YQ9BQ87 522 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 ZDHHC4Q9NPG8 344 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 ELOVL2Q9NXB9 296 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 RABGEF1Q9UJ41 708 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 TTC28Q96AY4 2481 aa28.1■■■□□ 2.09
CCM2-218ENST00000541586 EXOC1LA0A1B0GW35 172 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 K7EQS6 105 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 SNAP91O60641 907 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 PMPCBO75439 489 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 SPAG6O75602 509 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 ZMPSTE24O75844 475 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 MMP2P08253 660 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 TARSP26639 723 aaKnown RBP28.09■■■□□ 2.09
CCM2-218ENST00000541586 ARF5P84085 180 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 MPP3Q13368 585 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 RFTN1Q14699 578 aaPredicted RBP28.09■■■□□ 2.09
CCM2-218ENST00000541586 EMC10Q5UCC4 262 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 BBS5Q8N3I7 341 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 DDX51Q8N8A6 666 aaKnown RBP eCLIP28.09■■■□□ 2.09
CCM2-218ENST00000541586 ARRDC2Q8TBH0 407 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 FBF1Q8TES7 1133 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 CYB5D2Q8WUJ1 264 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 EZH1Q92800 747 aaPredicted RBP28.09■■■□□ 2.09
CCM2-218ENST00000541586 STAMBPL1Q96FJ0 436 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 PKNOX2Q96KN3 472 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 POLR1EQ9GZS1 481 aaKnown RBP28.09■■■□□ 2.09
CCM2-218ENST00000541586 SYBUQ9NX95 663 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 BCCIPQ9P287 314 aaKnown RBP eCLIP28.09■■■□□ 2.09
CCM2-218ENST00000541586 SEPT3Q9UH03 358 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 TTC24A2A3L6 582 aaPredicted RBP28.09■■■□□ 2.09
CCM2-218ENST00000541586 POLR3GO15318 223 aaPredicted RBP28.09■■■□□ 2.09
CCM2-218ENST00000541586 AGTP01019 485 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 IVLP07476 585 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 ADRA1AP35348 466 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 CD86P42081 329 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 CASC4Q6P4E1 433 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 KDELC1Q6UW63 502 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 KIAA0907Q7Z7F0 614 aaPredicted RBP28.09■■■□□ 2.09
CCM2-218ENST00000541586 WFIKKN2Q8TEU8 576 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 PGM2Q96G03 612 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 MRGPRX2Q96LB1 330 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 TRIM56Q9BRZ2 755 aaKnown RBP28.09■■■□□ 2.09
CCM2-218ENST00000541586 FICDQ9BVA6 458 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 LTB4R2Q9NPC1 389 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 BFARQ9NZS9 450 aa28.09■■■□□ 2.09
CCM2-218ENST00000541586 SLC34A2O95436 690 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 PDGFBP01127 241 aaPredicted RBP28.08■■■□□ 2.09
CCM2-218ENST00000541586 CDH17Q12864 832 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 IHHQ14623 411 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 AGBL2Q5U5Z8 902 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 UNC5AQ6ZN44 842 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 SH2D3CQ8N5H7 860 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 DCAF4L2Q8NA75 395 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 RPL10LQ96L21 214 aaKnown RBP28.08■■■□□ 2.09
CCM2-218ENST00000541586 PSKH2Q96QS6 385 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 CINPQ9BW66 212 aaPredicted RBP28.08■■■□□ 2.09
CCM2-218ENST00000541586 ACSS3Q9H6R3 686 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 VPS45Q9NRW7 570 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 VPS18Q9P253 973 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 ATG2BQ96BY7 2078 aa28.08■■■□□ 2.09
CCM2-218ENST00000541586 BDP1A6H8Y1 2624 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 TCRBV9S1A1TA0A576 114 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 HMGB1P1B2RPK0 211 aaPredicted RBP28.07■■■□□ 2.08
CCM2-218ENST00000541586 CD160O95971 181 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 TIE1P35590 1138 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 CTSOP43234 321 aaPredicted RBP28.07■■■□□ 2.08
CCM2-218ENST00000541586 TNFRSF4P43489 277 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 WNT3AP56704 352 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 DMC1Q14565 340 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 C2orf27AQ580R0 203 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 ALG1LQ6GMV1 187 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 LINGO4Q6UY18 593 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 TADA1Q96BN2 335 aa28.07■■■□□ 2.08
CCM2-218ENST00000541586 SEMA3CQ99985 751 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms