RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SPPL2BQ8TCT7 592 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 FBXO32Q969P5 355 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 LENG8Q96PV6 779 aaPredicted RBP17.36■□□□□ 0.37
SPIDR-227ENST00000541342 RBBP8Q99708 897 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 CENPKQ9BS16 269 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 CAB39LQ9H9S4 337 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ACSS2Q9NR19 701 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 KLHL8Q9P2G9 620 aaPredicted RBP17.36■□□□□ 0.37
SPIDR-227ENST00000541342 TLR6Q9Y2C9 796 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 GLDCP23378 1020 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 PIK3R6Q5UE93 754 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 TMCO2Q7Z6W1 182 aaPredicted RBP17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ARHGAP12Q8IWW6 846 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ARHGAP18Q8N392 663 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 AGR3Q8TD06 166 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 CPNE1Q99829 537 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 FAM96AQ9H5X1 160 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 ATP11BQ9Y2G3 1177 aa17.36■□□□□ 0.37
SPIDR-227ENST00000541342 CAPN8A6NHC0 703 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 ZBTB24O43167 697 aaPredicted RBP17.35■□□□□ 0.37
SPIDR-227ENST00000541342 SMIM18P0DKX4 95 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 RPL17P18621 184 aaKnown RBP17.35■□□□□ 0.37
SPIDR-227ENST00000541342 MX2P20592 715 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 RPS6KA3P51812 740 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 TAF10Q12962 218 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 PDK3Q15120 406 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 TLR1Q15399 786 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 SATL1Q86VE3 508 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 ARHGAP26Q9UNA1 814 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 LTBP2Q14767 1821 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 H7C4K7 107 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 USP12O75317 370 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 OR6B1O95007 311 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 PRDX6P30041 224 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 CCDC153Q494R4 210 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 MMEL1Q495T6 779 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 PPM1LQ5SGD2 360 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 C1orf53Q5VUE5 145 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 FBXO22Q8NEZ5 403 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 OR52K1Q8NGK4 314 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 SPATA17Q96L03 361 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 RTKNQ9BST9 563 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 BRD8Q9H0E9 1235 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.35■□□□□ 0.37
SPIDR-227ENST00000541342 DOCK4Q8N1I0 1966 aa17.35■□□□□ 0.37
SPIDR-227ENST00000541342 E9PAM4 449 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 POLBP06746 335 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 ATF6P18850 670 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 ALDH7A1P49419 539 aaKnown RBP17.34■□□□□ 0.37
SPIDR-227ENST00000541342 FOLH1Q04609 750 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 EFEMP1Q12805 493 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 ANKRD20A4Q4UJ75 823 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 TMC7Q7Z402 723 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 AGAP3Q96P47 875 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 OCEL1Q9H607 264 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 ZCWPW2A0A1B0GU75 182 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 PEX1O43933 1283 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 CCR10P46092 362 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 LIMK2P53671 638 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 IKBKEQ14164 716 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 GRTP1Q5TC63 336 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 CNKSR3Q6P9H4 555 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 GIPC2Q8TF65 315 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 GCNAQ96QF7 691 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 NAT9Q9BTE0 207 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 MCMBPQ9BTE3 642 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 MPP6Q9NZW5 540 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 AP1G1O43747 822 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 CHRNGP07510 517 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 RNF168Q8IYW5 571 aaPredicted RBP17.34■□□□□ 0.37
SPIDR-227ENST00000541342 ZNF419Q96HQ0 510 aaPredicted RBP17.34■□□□□ 0.37
SPIDR-227ENST00000541342 VCX3BQ9H321 246 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 SSX2IPQ9Y2D8 614 aa17.34■□□□□ 0.37
SPIDR-227ENST00000541342 DFFAO00273 331 aa17.33■□□□□ 0.37
SPIDR-227ENST00000541342 SERPINB5P36952 375 aa17.33■□□□□ 0.37
SPIDR-227ENST00000541342 PGGT1BP53609 377 aa17.33■□□□□ 0.37
SPIDR-227ENST00000541342 MLLT6P55198 1093 aaPredicted RBP17.33■□□□□ 0.37
SPIDR-227ENST00000541342 TBX4P57082 545 aa17.33■□□□□ 0.37
SPIDR-227ENST00000541342 STRA8Q7Z7C7 330 aa17.33■□□□□ 0.37
SPIDR-227ENST00000541342 NAT14Q8WUY8 206 aa17.33■□□□□ 0.37
SPIDR-227ENST00000541342 WDR55Q9H6Y2 383 aaPredicted RBP17.33■□□□□ 0.37
SPIDR-227ENST00000541342 UBAP1Q9NZ09 502 aa17.33■□□□□ 0.37
SPIDR-227ENST00000541342 CLIC5Q9NZA1 410 aa17.33■□□□□ 0.37
SPIDR-227ENST00000541342 SLC4A7Q9Y6M7 1214 aa17.33■□□□□ 0.37
SPIDR-227ENST00000541342 C15orf38-AP3S2A0A0A6YYH1 394 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 GOLGA8QA0A0J9YX86 632 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 GOLGA8OA6NCC3 632 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 GOLGA8NF8WBI6 632 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 ITGB8P26012 769 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 CHN2P52757 468 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 LSAMPQ13449 338 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 SPANXN3Q5MJ09 141 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 ARPINQ7Z6K5 226 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 ZNF683Q8IZ20 524 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 TMEM151AQ8N4L1 468 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 IGSF21Q96ID5 467 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 SLC39A8Q9C0K1 460 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 GBA3Q9H227 469 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 TMEM39AQ9NV64 488 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 TXNDC16Q9P2K2 825 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms