RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NEK4P51957 841 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 CYP24A1Q07973 514 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 EIF3IQ13347 325 aaKnown RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 ZNF177Q13360 481 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 CLCA4Q14CN2 919 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 SNRNP35Q16560 246 aaKnown RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 IFI16Q16666 785 aaKnown RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 SKIDA1Q1XH10 827 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 ZNF699Q32M78 642 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 SETMARQ53H47 684 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 ZNF667Q5HYK9 610 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 MANEAQ5SRI9 462 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 ADGRF1Q5T601 910 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 ZCCHC8Q6NZY4 707 aaKnown RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 STXBP4Q6ZWJ1 553 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 TRIM69Q86WT6 500 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 DTX1Q86Y01 620 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 C12orf29Q8N999 325 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 SPATA20Q8TB22 786 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 RNF141Q8WVD5 230 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 JAKMIP2Q96AA8 810 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 ARRDC3Q96B67 414 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 LMLNQ96KR4 655 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 MRGPRX3Q96LB0 322 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 FUCA2Q9BTY2 467 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 SEPT10Q9P0V9 454 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 PLEKHB1Q9UF11 243 aaPredicted RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 TUBD1Q9UJT1 453 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 SRPK3Q9UPE1 567 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 HBS1LQ9Y450 684 aaKnown RBP4.75□□□□□ -1.65
SNHG1-214ENST00000540865 KIF3AQ9Y496 699 aa4.75□□□□□ -1.65
SNHG1-214ENST00000540865 ITIH6Q6UXX5 1313 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 OTOGQ6ZRI0 2925 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 ICE1Q9Y2F5 2266 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 SHISA3A0PJX4 238 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 CPED1A4D0V7 1026 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 PMS2P1A4D2B8 440 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 TTC34A8MYJ7 566 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 PLD2O14939 933 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 NVLO15381 856 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 IRAK2O43187 625 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 PLRG1O43660 514 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 TP53P04637 393 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 CENPBP07199 599 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 IDEP14735 1019 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 ADORA2BP29275 332 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 MAT2AP31153 395 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 AKT2P31751 481 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 CD70P32970 193 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 DRD3P35462 400 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 CSKP41240 450 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 NDST1P52848 882 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 AP3M2P53677 418 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 HNRNPKP61978 463 aaKnown RBP eCLIP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 SNRPFP62306 86 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 ELAVL3Q14576 367 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 NR0B2Q15466 257 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 TGIF1Q15583 401 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 SGSM1Q2NKQ1 1148 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 PIK3R6Q5UE93 754 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 FAM46CQ5VWP2 391 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 HIST2H2BCQ6DN03 193 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 GUSBP11Q6P575 273 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 BORAQ6PGQ7 559 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 SCARA5Q6ZMJ2 495 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 C22orf34Q6ZV56 151 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 RSRC2Q7L4I2 434 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 EFL1Q7Z2Z2 1120 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 DSG4Q86SJ6 1040 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 PTRH1Q86Y79 214 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 DCP2Q8IU60 420 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 TMEM145Q8NBT3 493 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 FIBINQ8TAL6 211 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 CCDC127Q96BQ5 260 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 CYFIP2Q96F07 1278 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 ZSCAN31Q96LW9 406 aaPredicted RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 DUSP16Q9BY84 665 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 FGFBP2Q9BYJ0 223 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 UBXN6Q9BZV1 441 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 SDCBP2Q9H190 292 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 PREBQ9HCU5 417 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 OLA1Q9NTK5 396 aaKnown RBP4.74□□□□□ -1.65
SNHG1-214ENST00000540865 FAM49BQ9NUQ9 324 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 CCDC39Q9UFE4 941 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 ERVW-1Q9UQF0 538 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 ST14Q9Y5Y6 855 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 CSNK1G3Q9Y6M4 447 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 TCHHQ07283 1943 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 MYLKQ15746 1914 aa4.74□□□□□ -1.65
SNHG1-214ENST00000540865 TMEM131Q92545 1883 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 CRYBG3Q68DQ2 2970 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 NTN3O00634 580 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-214ENST00000540865 TPP1O14773 563 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 SLC31A1O15431 190 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 TBL1XO60907 577 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 RTN2O75298 545 aa4.73□□□□□ -1.65
SNHG1-214ENST00000540865 NEBLO76041 1014 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms