RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 HADHAP40939 763 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 NR4A2P43354 598 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 FLT3LGP49771 235 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ESRRGP62508 458 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 TUBA4AP68366 448 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 BFSP2Q13515 415 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 INSCQ1MX18 579 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 CTXN3Q4LDR2 81 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PPM1LQ5SGD2 360 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ZBTB41Q5SVQ8 909 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 EGFLAMQ63HQ2 1017 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PPP2R2DQ66LE6 453 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 RGMBQ6NW40 437 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ATG14Q6ZNE5 492 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 RFPL4BQ6ZWI9 263 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 CLVS1Q8IUQ0 354 aaPredicted RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 ZNF781Q8N8C0 355 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 TMEM102Q8N9M5 508 aaPredicted RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 RDM1Q8NG50 284 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 RP9Q8TA86 221 aaKnown RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 SEPT8Q92599 483 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 HPS1Q92902 700 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 RCN3Q96D15 328 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ZBTB45Q96K62 511 aaPredicted RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 TMEM79Q9BSE2 394 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 KATNBL1Q9H079 304 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ABHD16BQ9H3Z7 469 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 CERS4Q9HA82 394 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ITGB1BP2Q9UKP3 347 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PRELID1Q9Y255 219 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 RNF11Q9Y3C5 154 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ST14Q9Y5Y6 855 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PDCD11Q14690 1871 aaKnown RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 H3BNH8 94 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PSMD11O00231 422 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 MATN2O00339 956 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PLOD2O00469 737 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PMPCBO75439 489 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 BCAS2O75934 225 aaPredicted RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 URODP06132 367 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 SUPT20HL2P0C7V6 817 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PABPC1P11940 636 aaKnown RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 TPSB2P20231 275 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 TGM2P21980 687 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 EPHA3P29320 983 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ARRB2P32121 409 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 MAGEA3P43357 314 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 BCAP31P51572 246 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 NDST2P52849 883 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 STX1BP61266 288 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 BNIP3Q12983 259 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 NOGQ13253 232 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ART3Q13508 389 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 CEACAM7Q14002 265 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 TPSAB1Q15661 275 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 LDLRAD1Q5T700 205 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 C4orf22Q6V702 233 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 DCDC5Q6ZRR9 648 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 USP43Q70EL4 1123 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 CHST15Q7LFX5 561 aaPredicted RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 XYLT1Q86Y38 959 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 CDKL3Q8IVW4 592 aaPredicted RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 TDRD5Q8NAT2 981 aaKnown RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 SLC4A11Q8NBS3 891 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 BORCS5Q969J3 196 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 RNF157Q96PX1 679 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 WDR41Q9HAD4 459 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 POLE4Q9NR33 117 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 VPS45Q9NRW7 570 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 TMEM216Q9P0N5 145 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 FBXO9Q9UK97 447 aaPredicted RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 GOLGA8QA0A0J9YX86 632 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 BCLAF3A2AJT9 711 aaKnown RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 GOLGA8OA6NCC3 632 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 KPNA7A9QM74 516 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 GOLGA8NF8WBI6 632 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 GPR25O00155 361 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 GPR182O15218 404 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 RNASEH2AO75792 299 aaKnown RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 CAPNS1P04632 268 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 GLDCP23378 1020 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 TYK2P29597 1187 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 SOX11P35716 441 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ARL2P36404 184 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 AVPR1AP37288 418 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 TAF6P49848 677 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 AP3M2P53677 418 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 MYL6P60660 151 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 MS4A2Q01362 244 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 NAB1Q13506 487 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 CCDC153Q494R4 210 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 PERM1Q5SV97 790 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 ZNF534Q76KX8 674 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 RBM23Q86U06 439 aaKnown RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 CARM1Q86X55 608 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 DCP1BQ8IZD4 617 aaKnown RBP5.28□□□□□ -1.56
PROM1-220ENST00000540805 DNERQ8NFT8 737 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 HM13Q8TCT9 377 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 STARD8Q92502 1023 aa5.28□□□□□ -1.56
PROM1-220ENST00000540805 MRPS31Q92665 395 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms