RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 SIX3O95343 332 aaPredicted RBP13.78□□□□□ -0.2
BNIP3-202ENST00000540159 PCSK1P29120 753 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 KCNC1P48547 511 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 CSE1LP55060 971 aaKnown RBP13.78□□□□□ -0.2
BNIP3-202ENST00000540159 SCAPQ12770 1279 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 PRKAA1Q13131 559 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 CYTH1Q15438 398 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 CNPY1Q3B7I2 92 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 ALFQ53S48 1182 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 DCLRE1AQ6PJP8 1040 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 ARPINQ7Z6K5 226 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 AMIGO2Q86SJ2 522 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 DCBLD1Q8N8Z6 715 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 STYXQ8WUJ0 223 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 DNAJC1Q96KC8 554 aaKnown RBP13.78□□□□□ -0.2
BNIP3-202ENST00000540159 MRGPRX2Q96LB1 330 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 KIFC1Q9BW19 673 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 CDH9Q9ULB4 789 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 PADI3Q9ULW8 664 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 UNC80Q8N2C7 3258 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 TSPAN3O60637 253 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 RPL10P27635 214 aaKnown RBP13.78□□□□□ -0.2
BNIP3-202ENST00000540159 CCR1P32246 355 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 ARCN1P48444 511 aaKnown RBP13.78□□□□□ -0.2
BNIP3-202ENST00000540159 CD151P48509 253 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 CDC42EP1Q00587 391 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 EFEMP1Q12805 493 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 TRIM32Q13049 653 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 PTK2BQ14289 1009 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 IHHQ14623 411 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 PSMD5Q16401 504 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 CMPK2Q5EBM0 449 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 RAB41Q5JT25 222 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 KDM1BQ8NB78 822 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 BLOC1S5Q8TDH9 187 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 ADAM2Q99965 735 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 UBAP1Q9NZ09 502 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 MARCH4Q9P2E8 410 aaPredicted RBP13.78□□□□□ -0.2
BNIP3-202ENST00000540159 MYLKQ15746 1914 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 C5orf42Q9H799 3197 aa13.78□□□□□ -0.2
BNIP3-202ENST00000540159 IRAK2O43187 625 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 CABYRO75952 493 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 F9P00740 461 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 CDK18Q07002 472 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 CBLBQ13191 982 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 SPATA2LQ8IUW3 424 aaPredicted RBP13.77□□□□□ -0.2
BNIP3-202ENST00000540159 DIS3LQ8TF46 1054 aaKnown RBP13.77□□□□□ -0.2
BNIP3-202ENST00000540159 HDAC10Q969S8 669 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 PSMG2Q969U7 264 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 EXOC2Q96KP1 924 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 GPR78Q96P69 363 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 NCKIPSDQ9NZQ3 722 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 AAR2Q9Y312 384 aaKnown RBP13.77□□□□□ -0.2
BNIP3-202ENST00000540159 TCAF1Q9Y4C2 921 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 HS3ST4Q9Y661 456 aa13.77□□□□□ -0.2
BNIP3-202ENST00000540159 TMEM114B3SHH9 223 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 E9PAM4 449 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 IL23RQ5VWK5 629 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 SPRYD7Q5W111 196 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 AAGABQ6PD74 315 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 ST13P4Q8IZP2 240 aaPredicted RBP13.77□□□□□ -0.21
BNIP3-202ENST00000540159 HMCESQ96FZ2 354 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 PRPF18Q99633 342 aaKnown RBP13.77□□□□□ -0.21
BNIP3-202ENST00000540159 GRIP2Q9C0E4 1043 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 MRPL46Q9H2W6 279 aaKnown RBP13.77□□□□□ -0.21
BNIP3-202ENST00000540159 SLC38A7Q9NVC3 462 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 STK39Q9UEW8 545 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 NCF1BA6NI72 391 aaPredicted RBP13.77□□□□□ -0.21
BNIP3-202ENST00000540159 NCF1CA8MVU1 366 aaPredicted RBP13.77□□□□□ -0.21
BNIP3-202ENST00000540159 E7ENX8 843 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 SDHDO14521 159 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 GPC4O75487 556 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 ODC1P11926 461 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 MYL4P12829 197 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 NCF1P14598 390 aaPredicted RBP13.77□□□□□ -0.21
BNIP3-202ENST00000540159 IRX1P78414 480 aaPredicted RBP13.77□□□□□ -0.21
BNIP3-202ENST00000540159 CDKL1Q00532 357 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 GALNT3Q14435 633 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 ZNF423Q2M1K9 1284 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 FAM83EQ2M2I3 478 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 LIN52Q52LA3 116 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 INTS6LQ5JSJ4 861 aaKnown RBP13.77□□□□□ -0.21
BNIP3-202ENST00000540159 PM20D1Q6GTS8 502 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 METTL23Q86XA0 190 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 CFAP52Q8N1V2 620 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 ESAMQ96AP7 390 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 NEU3Q9UQ49 428 aa13.77□□□□□ -0.21
BNIP3-202ENST00000540159 MAGEB16A2A368 324 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 ERI2A8K979 691 aaKnown RBP13.76□□□□□ -0.21
BNIP3-202ENST00000540159 MTSS1O43312 755 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 CES1P23141 567 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 USP46P62068 366 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 YBX1P67809 324 aaKnown RBP13.76□□□□□ -0.21
BNIP3-202ENST00000540159 SULT2A1Q06520 285 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 SCIMPQ6UWF3 145 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 SCD5Q86SK9 330 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 LINC00523Q86TU6 105 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 ATAD1Q8NBU5 361 aa13.76□□□□□ -0.21
BNIP3-202ENST00000540159 ZC3H15Q8WU90 426 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms