RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 DESI2Q9BSY9 194 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 ZDHHC5Q9C0B5 715 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 SUV39H2Q9H5I1 410 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 GAREM1Q9H706 876 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 FZD3Q9NPG1 666 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 DNAAF2Q9NVR5 837 aaKnown RBP18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 DDX56Q9NY93 547 aaKnown RBP18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 DTLQ9NZJ0 730 aa18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 TPX2Q9ULW0 747 aaKnown RBP18.5■□□□□ 0.55
SNRPA1-203ENST00000540017 ASCC3Q8N3C0 2202 aaKnown RBP18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 TSPAN11A1L157 253 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 BTNL10A8MVZ5 291 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 VILLO15195 856 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 IPO7O95373 1038 aaKnown RBP18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 CR2P20023 1033 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 CD38P28907 300 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 CTSKP43235 329 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 SCNN1BP51168 640 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 MAXP61244 160 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 ZNF235Q14590 738 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 SETMARQ53H47 684 aaPredicted RBP18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 SLC9A4Q6AI14 798 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 ADAT2Q7Z6V5 191 aaKnown RBP18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 VSIG1Q86XK7 387 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 LRRC49Q8IUZ0 686 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 KRT35Q92764 455 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 RAB7BQ96AH8 199 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 TUBGCP5Q96RT8 1024 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 MYOCQ99972 504 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 TRIM10Q9UDY6 481 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 DMTF1Q9Y222 760 aa18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 FNDC3AQ9Y2H6 1198 aaKnown RBP18.49■□□□□ 0.55
SNRPA1-203ENST00000540017 TMEM131Q92545 1883 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 IGLON5A6NGN9 336 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 PSTPIP1O43586 416 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 OPHN1O60890 802 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 CD59P13987 128 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 NUDT1P36639 197 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 CDKN2BP42772 138 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 MMP13P45452 471 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 RENBPP51606 427 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 GRM3Q14832 879 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 LLGL1Q15334 1064 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 TAZQ16635 292 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 IFI16Q16666 785 aaKnown RBP18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 PRAMEF14Q5SWL7 426 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 FAM182AQ5T1J6 154 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 MARC1Q5VT66 337 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 NPNTQ6UXI9 565 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 DAAM2Q86T65 1068 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 TEX26Q8N6G2 289 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 TMEM145Q8NBT3 493 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 MAML1Q92585 1016 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 FEM1CQ96JP0 617 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 ZNF641Q96N77 438 aaPredicted RBP18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 TSGA13Q96PP4 275 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 MGME1Q9BQP7 344 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 KNL1Q8NG31 2342 aa18.48■□□□□ 0.55
SNRPA1-203ENST00000540017 TRPM6Q9BX84 2022 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 ANKRD36A6QL64 1941 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 PRAMEF26H0Y7S4 382 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 H0Y8X5 98 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 TRAFD1O14545 582 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 MATN3O15232 486 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 RAD51BO15315 384 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 TSPAN6O43657 245 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 PAK4O96013 591 aaPredicted RBP18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 PRKCGP05129 697 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 KRT10P13645 584 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 CCNCP24863 283 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 RPS21P63220 83 aaKnown RBP18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 SEMG2Q02383 582 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 BCL2L1Q07817 233 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 ADCY2Q08462 1091 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 UGP2Q16851 508 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 KIAA1161Q6NSJ0 714 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 KIAA1328Q86T90 577 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 RFX6Q8HWS3 928 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 HCAR2Q8TDS4 363 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 ECHDC3Q96DC8 303 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 NUDCD1Q96RS6 583 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 LGMNQ99538 433 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 C1QTNF2Q9BXJ5 285 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 SLC17A9Q9BYT1 436 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 ATP13A3Q9H7F0 1226 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 NOD2Q9HC29 1040 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 NT5MQ9NPB1 228 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 PCDHGC4Q9Y5F7 938 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 HEY1Q9Y5J3 304 aa18.47■□□□□ 0.55
SNRPA1-203ENST00000540017 TP53BP1Q12888 1972 aaPredicted RBP18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 UPK3BL1B0FP48 263 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 UPK3BL2E5RIL1 263 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 TLR4O00206 839 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 NEMP1O14524 444 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 APOL1O14791 398 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 GIPC1O14908 333 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 CER1O95813 267 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 SERPINA4P29622 427 aa18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 HSPA9P38646 679 aaKnown RBP18.46■□□□□ 0.55
SNRPA1-203ENST00000540017 C21orf59P57076 290 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms