RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 KIF20BQ96Q89 1820 aa12.92□□□□□ -0.34
CACNB4-210ENST00000539935 CYP4F2P78329 520 aa12.92□□□□□ -0.34
CACNB4-210ENST00000539935 CYP4F3Q08477 520 aa12.92□□□□□ -0.34
CACNB4-210ENST00000539935 NR1D2Q14995 579 aa12.92□□□□□ -0.34
CACNB4-210ENST00000539935 STYK1Q6J9G0 422 aa12.92□□□□□ -0.34
CACNB4-210ENST00000539935 SCUBE3Q8IX30 993 aa12.92□□□□□ -0.34
CACNB4-210ENST00000539935 RP9Q8TA86 221 aaKnown RBP12.92□□□□□ -0.34
CACNB4-210ENST00000539935 SEMA6BQ9H3T3 888 aa12.92□□□□□ -0.34
CACNB4-210ENST00000539935 INTS10Q9NVR2 710 aaKnown RBP12.92□□□□□ -0.34
CACNB4-210ENST00000539935 TUBA8Q9NY65 449 aaPredicted RBP12.92□□□□□ -0.34
CACNB4-210ENST00000539935 PGRMC2O15173 223 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ZNF286BP0CG31 522 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 TGFB3P10600 412 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 BACE1P56817 501 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 DOK6Q6PKX4 331 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ZYG11AQ6WRX3 759 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 PXMP2Q9NR77 195 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 MCIDASD6RGH6 385 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 RSL1D1O76021 490 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 RPL21P46778 160 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 PKNOX1P55347 436 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 MAPKAPK3Q16644 382 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 GTF2IRD2BQ6EKJ0 949 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 NET1Q7Z628 596 aaPredicted RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 GTF2IRD2Q86UP8 949 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 PRDM16Q9HAZ2 1276 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 PLIN3O60664 434 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 CATP04040 527 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 MNDAP41218 407 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 PRKAG1P54619 331 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ACAP2Q15057 778 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 HSDL1Q3SXM5 330 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 GPAT3Q53EU6 434 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 TXNRD3Q86VQ6 643 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ZC3H7AQ8IWR0 971 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ZCCHC9Q8N567 271 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 SPATA20Q8TB22 786 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 PIH1D1Q9NWS0 290 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 KLQ9UEF7 1012 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 R3HDM2Q9Y2K5 976 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 KPNA3O00505 521 aaPredicted RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 AXIN1O15169 862 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 OR10H2O60403 315 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 YBX3P16989 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 EN1Q05925 392 aaPredicted RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ZNF844Q08AG5 666 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 INSCQ1MX18 579 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 FBXO33Q7Z6M2 555 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 OSMRQ99650 979 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 STARD7Q9NQZ5 370 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 XYLBO75191 536 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 FAR1Q8WVX9 515 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 TESCQ96BS2 214 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 PCDHGC5Q9Y5F6 944 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 TPP1O14773 563 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 KCNT2Q6UVM3 1135 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 CES3Q6UWW8 571 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ARHGAP36Q6ZRI8 547 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 C4orf19Q8IY42 314 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 PIK3C3Q8NEB9 887 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 OR2L3Q8NG85 312 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 SGCDQ92629 289 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 AGO4Q9HCK5 861 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 FAM172BPA6NC97 362 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 LOC110117498-PIK3R3F6TDL0 507 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 CBX6O95503 412 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 SNRPB2P08579 225 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ANXA5P08758 320 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 RPL9P32969 192 aaKnown RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 SLC26A3P40879 764 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 SQLEQ14534 574 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 SPDYCQ5MJ68 293 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ZCCHC23Q6ZST2 131 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 ATCAYQ86WG3 371 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 PIK3R3Q92569 461 aa12.91□□□□□ -0.34
CACNB4-210ENST00000539935 CUEDC1Q9NWM3 386 aaPredicted RBP12.91□□□□□ -0.34
CACNB4-210ENST00000539935 KCNK1O00180 336 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 PSMG1O95456 288 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 NTRK1P04629 796 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 IFNA16P05015 189 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 FDPSP14324 419 aaKnown RBP12.9□□□□□ -0.34
CACNB4-210ENST00000539935 IL12AP29459 219 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 PERM1Q5SV97 790 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 FAM171A1Q5VUB5 890 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 FDXACB1Q9BRP7 624 aaPredicted RBP12.9□□□□□ -0.34
CACNB4-210ENST00000539935 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 CKLFQ9UBR5 152 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 RSL24D1Q9UHA3 163 aaKnown RBP12.9□□□□□ -0.34
CACNB4-210ENST00000539935 SSR3Q9UNL2 185 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 PIGNO95427 931 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 ITIH1P19827 911 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 NFKB1P19838 968 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 ALDH5A1P51649 535 aaPredicted RBP12.9□□□□□ -0.34
CACNB4-210ENST00000539935 TROAPQ12815 778 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 BICRALQ6AI39 1079 aa12.9□□□□□ -0.34
CACNB4-210ENST00000539935 MSL3Q8N5Y2 521 aaKnown RBP12.9□□□□□ -0.34
CACNB4-210ENST00000539935 KLHL23Q8NBE8 558 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms