RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 LRRC32Q14392 662 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 DLG2Q15700 870 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 LONRF1Q17RB8 773 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 MYLK3Q32MK0 819 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 KRT71Q3SY84 523 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 FUT11Q495W5 492 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 FSCBQ5H9T9 825 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 ARTNQ5T4W7 220 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 RNF187Q5TA31 235 aaPredicted RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 LYPLAL1Q5VWZ2 237 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 MRNIPQ6NTE8 343 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 PKN3Q6P5Z2 889 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 NCEH1Q6PIU2 408 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 SERPINA13PQ6UXR4 307 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 ARHGAP36Q6ZRI8 547 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 SDCCAG8Q86SQ7 713 aaPredicted RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 SLC26A11Q86WA9 606 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 IQCKQ8N0W5 287 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 MPP5Q8N3R9 675 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 SYNPOQ8N3V7 929 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 CCDC33Q8N5R6 958 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 TSEN2Q8NCE0 465 aaKnown RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 TMIEQ8NEW7 156 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 RAB7BQ96AH8 199 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 PGM2Q96G03 612 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 MYO19Q96H55 970 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 NELL2Q99435 816 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 KXD1Q9BQD3 176 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 MLPHQ9BV36 600 aaPredicted RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 KIFC1Q9BW19 673 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 TDRD1Q9BXT4 1180 aaKnown RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 CEP41Q9BYV8 373 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 C10orf88Q9H8K7 445 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 MAGEE1Q9HCI5 957 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 PSMC3IPQ9P2W1 217 aaPredicted RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 HECAQ9UBI9 543 aaPredicted RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 DKK3Q9UBP4 350 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 ZNF180Q9UJW8 692 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 CORO1CQ9ULV4 474 aaPredicted RBP11.9□□□□□ -0.5
VTN-202ENST00000539746 SOX13Q9UN79 622 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
VTN-202ENST00000539746 RGSL1A5PLK6 1076 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 AGTP01019 485 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 MYBL2P10244 700 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 SRFP11831 508 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 SRCP12931 536 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 HNRNPLP14866 589 aaKnown RBP eCLIP11.89□□□□□ -0.51
VTN-202ENST00000539746 ADRA1AP35348 466 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 PRAMEP78395 509 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 MRPS21P82921 87 aaKnown RBP11.89□□□□□ -0.51
VTN-202ENST00000539746 DSC2Q02487 901 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 MGAT5Q09328 741 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 TDGQ13569 410 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 SLC29A2Q14542 456 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 CYTH1Q15438 398 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 TAF1AQ15573 450 aaPredicted RBP11.89□□□□□ -0.51
VTN-202ENST00000539746 PCSK7Q16549 785 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 KYNUQ16719 465 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 FAXCQ5TGI0 409 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 STEAP4Q687X5 459 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 PTCRAQ6ISU1 281 aaPredicted RBP11.89□□□□□ -0.51
VTN-202ENST00000539746 KDELC1Q6UW63 502 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 PARM1Q6UWI2 310 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 ADIPOR2Q86V24 386 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 CAND1Q86VP6 1230 aaKnown RBP11.89□□□□□ -0.51
VTN-202ENST00000539746 OR52K1Q8NGK4 314 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 ARRDC2Q8TBH0 407 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 STYXQ8WUJ0 223 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 WBP2Q969T9 261 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 ALKBH8Q96BT7 664 aaKnown RBP11.89□□□□□ -0.51
VTN-202ENST00000539746 OXNAD1Q96HP4 312 aaPredicted RBP11.89□□□□□ -0.51
VTN-202ENST00000539746 LMLNQ96KR4 655 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 MRGPRX2Q96LB1 330 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 SEMA4AQ9H3S1 761 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 NOD2Q9HC29 1040 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 PPANQ9NQ55 473 aaKnown RBP11.89□□□□□ -0.51
VTN-202ENST00000539746 SLC2A4RGQ9NR83 387 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 NINJ2Q9NZG7 142 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 APPL1Q9UKG1 709 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 CHMP2BQ9UQN3 213 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 TCAF1Q9Y4C2 921 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 ACTL7BQ9Y614 415 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 RPS6KL1Q9Y6S9 549 aa11.89□□□□□ -0.51
VTN-202ENST00000539746 DOCK4Q8N1I0 1966 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 ANKRD66B4E2M5 251 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 H3BQ06 376 aaPredicted RBP11.88□□□□□ -0.51
VTN-202ENST00000539746 SLC7A4O43246 635 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 HTRA2O43464 458 aaPredicted RBP11.88□□□□□ -0.51
VTN-202ENST00000539746 SNAP91O60641 907 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 ATG13O75143 517 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 ADH1BP00325 375 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 PYGLP06737 847 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 FAM153BP0C7A2 387 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 CISD3P0C7P0 127 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 ARSAP15289 507 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 PRKCQQ04759 706 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 ZBTB16Q05516 673 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 ARHGEF7Q14155 803 aa11.88□□□□□ -0.51
VTN-202ENST00000539746 HNRNPA1L2Q32P51 320 aaKnown RBP11.88□□□□□ -0.51
VTN-202ENST00000539746 FAM153CQ494X1 144 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms